Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
RAB5BP61020 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
RAB5BP61020 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC11.86□□□□□ -0.51
RAB5BP61020 AC107956.1-201ENST00000494359 873 ntBASIC11.86□□□□□ -0.51
RAB5BP61020 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC11.86□□□□□ -0.51
RAB5BP61020 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 NT5C-210ENST00000582160 860 ntTSL 2 BASIC11.86□□□□□ -0.51
RAB5BP61020 SPIB-206ENST00000596074 847 ntTSL 2 BASIC11.86□□□□□ -0.51
RAB5BP61020 AL136038.4-201ENST00000603606 1261 ntBASIC11.86□□□□□ -0.51
RAB5BP61020 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC11.86□□□□□ -0.51
RAB5BP61020 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC11.86□□□□□ -0.51
RAB5BP61020 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC11.86□□□□□ -0.51
RAB5BP61020 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
RAB5BP61020 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC11.86□□□□□ -0.51
RAB5BP61020 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC11.86□□□□□ -0.51
RAB5BP61020 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC11.86□□□□□ -0.51
RAB5BP61020 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC11.86□□□□□ -0.51
RAB5BP61020 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
RAB5BP61020 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
RAB5BP61020 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
RAB5BP61020 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB5BP61020 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
RAB5BP61020 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
RAB5BP61020 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB5BP61020 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB5BP61020 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
RAB5BP61020 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RAB5BP61020 AC027369.3-201ENST00000530465 3707 ntBASIC11.85□□□□□ -0.51
RAB5BP61020 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB5BP61020 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RAB5BP61020 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RAB5BP61020 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC11.85□□□□□ -0.51
RAB5BP61020 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB5BP61020 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC11.85□□□□□ -0.51
RAB5BP61020 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB5BP61020 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
RAB5BP61020 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
RAB5BP61020 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB5BP61020 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB5BP61020 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB5BP61020 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB5BP61020 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB5BP61020 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB5BP61020 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB5BP61020 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB5BP61020 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB5BP61020 IGHGP-201ENST00000390555 1178 ntBASIC11.85□□□□□ -0.51
RAB5BP61020 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB5BP61020 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB5BP61020 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB5BP61020 AC011467.4-201ENST00000594891 528 ntBASIC11.85□□□□□ -0.51
RAB5BP61020 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC11.85□□□□□ -0.51
RAB5BP61020 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB5BP61020 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
RAB5BP61020 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC11.85□□□□□ -0.51
RAB5BP61020 AC027020.2-201ENST00000602585 2389 ntBASIC11.85□□□□□ -0.51
RAB5BP61020 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB5BP61020 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
RAB5BP61020 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC11.85□□□□□ -0.51
RAB5BP61020 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RAB5BP61020 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB5BP61020 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC11.85□□□□□ -0.51
RAB5BP61020 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB5BP61020 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC11.85□□□□□ -0.51
RAB5BP61020 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC11.84□□□□□ -0.51
RAB5BP61020 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
RAB5BP61020 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 AL031719.1-201ENST00000623365 2587 ntBASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms