Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CLDN8P56748 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN8P56748 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN8P56748 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN8P56748 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CLDN8P56748 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN8P56748 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN8P56748 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CLDN8P56748 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CLDN8P56748 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CLDN8P56748 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN8P56748 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLDN8P56748 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CLDN8P56748 LINC01230-201ENST00000625222 3017 ntBASIC14.41□□□□□ -0.1
CLDN8P56748 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN8P56748 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CLDN8P56748 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN8P56748 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN8P56748 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLDN8P56748 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN8P56748 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN8P56748 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN8P56748 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CLDN8P56748 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.41□□□□□ -0.1
CLDN8P56748 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN8P56748 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN8P56748 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.41□□□□□ -0.1
CLDN8P56748 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN8P56748 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN8P56748 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CLDN8P56748 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.41□□□□□ -0.1
CLDN8P56748 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.41□□□□□ -0.1
CLDN8P56748 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.41□□□□□ -0.1
CLDN8P56748 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CLDN8P56748 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.41□□□□□ -0.1
CLDN8P56748 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CLDN8P56748 AC093813.1-201ENST00000605066 256 ntBASIC14.41□□□□□ -0.1
CLDN8P56748 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.41□□□□□ -0.1
CLDN8P56748 PRSS30P-206ENST00000641773 873 ntBASIC14.41□□□□□ -0.1
CLDN8P56748 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN8P56748 AC022144.1-201ENST00000602255 1580 ntBASIC14.41□□□□□ -0.1
CLDN8P56748 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.41□□□□□ -0.1
CLDN8P56748 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN8P56748 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.41□□□□□ -0.1
CLDN8P56748 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN8P56748 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CLDN8P56748 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLDN8P56748 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN8P56748 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.41□□□□□ -0.1
CLDN8P56748 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN8P56748 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN8P56748 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN8P56748 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN8P56748 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN8P56748 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN8P56748 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.4□□□□□ -0.1
CLDN8P56748 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN8P56748 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CLDN8P56748 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN8P56748 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
CLDN8P56748 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
CLDN8P56748 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN8P56748 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN8P56748 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN8P56748 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CLDN8P56748 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CLDN8P56748 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN8P56748 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN8P56748 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN8P56748 AC006504.5-208ENST00000588784 2401 ntBASIC14.4□□□□□ -0.1
CLDN8P56748 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN8P56748 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CLDN8P56748 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CLDN8P56748 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN8P56748 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CLDN8P56748 AC055876.3-201ENST00000431496 288 ntBASIC14.4□□□□□ -0.1
CLDN8P56748 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN8P56748 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.4□□□□□ -0.1
CLDN8P56748 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN8P56748 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN8P56748 AC022447.6-201ENST00000515522 438 ntBASIC14.4□□□□□ -0.1
CLDN8P56748 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN8P56748 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.4□□□□□ -0.1
CLDN8P56748 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.4□□□□□ -0.1
CLDN8P56748 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.4□□□□□ -0.1
CLDN8P56748 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CLDN8P56748 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.4□□□□□ -0.1
CLDN8P56748 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.4□□□□□ -0.1
CLDN8P56748 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.4□□□□□ -0.1
CLDN8P56748 AC138649.4-201ENST00000612222 287 ntBASIC14.4□□□□□ -0.1
CLDN8P56748 AL390754.1-201ENST00000619088 582 ntBASIC14.4□□□□□ -0.1
CLDN8P56748 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN8P56748 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN8P56748 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CLDN8P56748 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN8P56748 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN8P56748 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN8P56748 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CLDN8P56748 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CLDN8P56748 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms