Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AC141586.5-201ENST00000624546 2050 ntBASIC16.63■□□□□ 0.25
LBX1P52954 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LBX1P52954 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
LBX1P52954 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LBX1P52954 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LBX1P52954 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LBX1P52954 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LBX1P52954 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LBX1P52954 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LBX1P52954 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LBX1P52954 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LBX1P52954 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LBX1P52954 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.62■□□□□ 0.25
LBX1P52954 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LBX1P52954 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LBX1P52954 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LBX1P52954 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LBX1P52954 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LBX1P52954 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LBX1P52954 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LBX1P52954 AL050341.2-201ENST00000567508 1541 ntBASIC16.62■□□□□ 0.25
LBX1P52954 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LBX1P52954 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LBX1P52954 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
LBX1P52954 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.62■□□□□ 0.25
LBX1P52954 AL773545.2-201ENST00000442149 472 ntBASIC16.62■□□□□ 0.25
LBX1P52954 CDK4P1-201ENST00000454213 828 ntBASIC16.62■□□□□ 0.25
LBX1P52954 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC16.62■□□□□ 0.25
LBX1P52954 PFN2-212ENST00000490975 858 ntTSL 4 BASIC16.62■□□□□ 0.25
LBX1P52954 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC16.62■□□□□ 0.25
LBX1P52954 AC092910.2-201ENST00000491262 348 ntBASIC16.62■□□□□ 0.25
LBX1P52954 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC16.62■□□□□ 0.25
LBX1P52954 VENTXP3-201ENST00000546480 773 ntBASIC16.62■□□□□ 0.25
LBX1P52954 HNRNPA1P5-201ENST00000558213 966 ntBASIC16.62■□□□□ 0.25
LBX1P52954 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC16.62■□□□□ 0.25
LBX1P52954 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.62■□□□□ 0.25
LBX1P52954 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LBX1P52954 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC16.62■□□□□ 0.25
LBX1P52954 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC16.62■□□□□ 0.25
LBX1P52954 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LBX1P52954 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LBX1P52954 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.62■□□□□ 0.25
LBX1P52954 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC16.62■□□□□ 0.25
LBX1P52954 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.62■□□□□ 0.25
LBX1P52954 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
LBX1P52954 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LBX1P52954 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LBX1P52954 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LBX1P52954 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.62■□□□□ 0.25
LBX1P52954 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC16.62■□□□□ 0.25
LBX1P52954 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
LBX1P52954 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LBX1P52954 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LBX1P52954 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LBX1P52954 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LBX1P52954 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LBX1P52954 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.62■□□□□ 0.25
LBX1P52954 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LBX1P52954 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LBX1P52954 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LBX1P52954 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.61■□□□□ 0.25
LBX1P52954 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LBX1P52954 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
LBX1P52954 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LBX1P52954 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.61■□□□□ 0.25
LBX1P52954 ALOX12P2-203ENST00000570921 1945 ntBASIC16.61■□□□□ 0.25
LBX1P52954 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LBX1P52954 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
LBX1P52954 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LBX1P52954 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC16.61■□□□□ 0.25
LBX1P52954 HLA-DMA-202ENST00000395303 1007 ntBASIC16.61■□□□□ 0.25
LBX1P52954 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC16.61■□□□□ 0.25
LBX1P52954 GALP-202ENST00000440823 889 ntTSL 5 BASIC16.61■□□□□ 0.25
LBX1P52954 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LBX1P52954 RN7SL578P-201ENST00000477781 283 ntBASIC16.61■□□□□ 0.25
LBX1P52954 IGHV1-12-201ENST00000518307 205 ntBASIC16.61■□□□□ 0.25
LBX1P52954 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC16.61■□□□□ 0.25
LBX1P52954 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC16.61■□□□□ 0.25
LBX1P52954 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC16.61■□□□□ 0.25
LBX1P52954 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LBX1P52954 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC16.61■□□□□ 0.25
LBX1P52954 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC16.61■□□□□ 0.25
LBX1P52954 BX088702.1-201ENST00000610784 235 ntBASIC16.61■□□□□ 0.25
LBX1P52954 AL591424.3-201ENST00000614278 872 ntBASIC16.61■□□□□ 0.25
LBX1P52954 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LBX1P52954 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LBX1P52954 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LBX1P52954 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LBX1P52954 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LBX1P52954 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LBX1P52954 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LBX1P52954 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
LBX1P52954 AC007292.2-201ENST00000593524 1812 ntBASIC16.61■□□□□ 0.25
LBX1P52954 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LBX1P52954 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
LBX1P52954 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LBX1P52954 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LBX1P52954 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
LBX1P52954 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LBX1P52954 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms