Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.54□□□□□ -0.24
SRP9P49458 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.54□□□□□ -0.24
SRP9P49458 AL033527.5-202ENST00000641632 1098 ntBASIC13.54□□□□□ -0.24
SRP9P49458 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.54□□□□□ -0.24
SRP9P49458 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.54□□□□□ -0.24
SRP9P49458 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.54□□□□□ -0.24
SRP9P49458 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SRP9P49458 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.54□□□□□ -0.24
SRP9P49458 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SRP9P49458 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 AC100757.3-201ENST00000622361 1406 ntBASIC13.54□□□□□ -0.24
SRP9P49458 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
SRP9P49458 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.54□□□□□ -0.24
SRP9P49458 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
SRP9P49458 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SRP9P49458 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
SRP9P49458 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
SRP9P49458 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
SRP9P49458 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.53□□□□□ -0.24
SRP9P49458 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SRP9P49458 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 ACE3P-201ENST00000423435 1973 ntBASIC13.53□□□□□ -0.24
SRP9P49458 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SRP9P49458 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SRP9P49458 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 MIR770-201ENST00000390219 98 ntBASIC13.53□□□□□ -0.24
SRP9P49458 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.53□□□□□ -0.24
SRP9P49458 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.53□□□□□ -0.24
SRP9P49458 FAM8A3P-201ENST00000427218 844 ntBASIC13.53□□□□□ -0.24
SRP9P49458 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.53□□□□□ -0.24
SRP9P49458 AC092580.3-201ENST00000430932 139 ntBASIC13.53□□□□□ -0.24
SRP9P49458 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.53□□□□□ -0.24
SRP9P49458 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.53□□□□□ -0.24
SRP9P49458 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.53□□□□□ -0.24
SRP9P49458 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.53□□□□□ -0.24
SRP9P49458 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.53□□□□□ -0.24
SRP9P49458 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.53□□□□□ -0.24
SRP9P49458 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.53□□□□□ -0.24
SRP9P49458 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.53□□□□□ -0.24
SRP9P49458 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 AL590560.3-201ENST00000623350 461 ntBASIC13.53□□□□□ -0.24
SRP9P49458 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.53□□□□□ -0.24
SRP9P49458 AC087499.5-201ENST00000452760 1342 ntBASIC13.53□□□□□ -0.24
SRP9P49458 AC089987.1-201ENST00000551654 2209 ntBASIC13.53□□□□□ -0.24
SRP9P49458 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.53□□□□□ -0.24
SRP9P49458 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SRP9P49458 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.53□□□□□ -0.24
SRP9P49458 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.53□□□□□ -0.24
SRP9P49458 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.53□□□□□ -0.24
SRP9P49458 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SRP9P49458 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SRP9P49458 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
SRP9P49458 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SRP9P49458 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.52□□□□□ -0.24
SRP9P49458 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
SRP9P49458 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SRP9P49458 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SRP9P49458 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SRP9P49458 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SRP9P49458 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SRP9P49458 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SRP9P49458 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
SRP9P49458 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.52□□□□□ -0.24
SRP9P49458 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SRP9P49458 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SRP9P49458 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SRP9P49458 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms