Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
KRT6CP48668 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KRT6CP48668 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KRT6CP48668 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
KRT6CP48668 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
KRT6CP48668 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KRT6CP48668 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.77□□□□□ -0.05
KRT6CP48668 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
KRT6CP48668 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KRT6CP48668 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
KRT6CP48668 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6CP48668 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.76□□□□□ -0.05
KRT6CP48668 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6CP48668 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6CP48668 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6CP48668 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6CP48668 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6CP48668 AC005089.1-201ENST00000619486 2241 ntBASIC14.76□□□□□ -0.05
KRT6CP48668 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
KRT6CP48668 AL360270.3-201ENST00000609118 1348 ntBASIC14.76□□□□□ -0.05
KRT6CP48668 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6CP48668 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6CP48668 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.76□□□□□ -0.05
KRT6CP48668 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6CP48668 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
KRT6CP48668 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.76□□□□□ -0.05
KRT6CP48668 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6CP48668 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6CP48668 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.76□□□□□ -0.05
KRT6CP48668 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
KRT6CP48668 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.76□□□□□ -0.05
KRT6CP48668 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6CP48668 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.76□□□□□ -0.05
KRT6CP48668 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6CP48668 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
KRT6CP48668 AC009407.1-201ENST00000568958 598 ntBASIC14.76□□□□□ -0.05
KRT6CP48668 AC036164.1-201ENST00000570544 333 ntBASIC14.76□□□□□ -0.05
KRT6CP48668 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.76□□□□□ -0.05
KRT6CP48668 SRD5A3P1-201ENST00000603021 949 ntBASIC14.76□□□□□ -0.05
KRT6CP48668 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6CP48668 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
KRT6CP48668 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.76□□□□□ -0.05
KRT6CP48668 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.76□□□□□ -0.05
KRT6CP48668 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
KRT6CP48668 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6CP48668 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6CP48668 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6CP48668 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6CP48668 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6CP48668 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6CP48668 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.76□□□□□ -0.05
KRT6CP48668 AC005252.3-201ENST00000623855 2258 ntBASIC14.76□□□□□ -0.05
KRT6CP48668 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.76□□□□□ -0.05
KRT6CP48668 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6CP48668 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6CP48668 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6CP48668 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.76□□□□□ -0.05
KRT6CP48668 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.75□□□□□ -0.05
KRT6CP48668 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6CP48668 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
KRT6CP48668 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6CP48668 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6CP48668 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.75□□□□□ -0.05
KRT6CP48668 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6CP48668 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6CP48668 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6CP48668 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6CP48668 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.75□□□□□ -0.05
KRT6CP48668 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.75□□□□□ -0.05
KRT6CP48668 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.75□□□□□ -0.05
KRT6CP48668 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.75□□□□□ -0.05
KRT6CP48668 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
KRT6CP48668 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6CP48668 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6CP48668 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6CP48668 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6CP48668 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6CP48668 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6CP48668 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.75□□□□□ -0.05
KRT6CP48668 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.75□□□□□ -0.05
KRT6CP48668 AC055876.3-201ENST00000431496 288 ntBASIC14.75□□□□□ -0.05
KRT6CP48668 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.75□□□□□ -0.05
KRT6CP48668 AL512638.1-201ENST00000457493 794 ntBASIC14.75□□□□□ -0.05
KRT6CP48668 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.75□□□□□ -0.05
KRT6CP48668 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.75□□□□□ -0.05
KRT6CP48668 AC138649.4-201ENST00000612222 287 ntBASIC14.75□□□□□ -0.05
KRT6CP48668 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
KRT6CP48668 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
KRT6CP48668 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.75□□□□□ -0.05
KRT6CP48668 AC022144.1-201ENST00000602255 1580 ntBASIC14.75□□□□□ -0.05
KRT6CP48668 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6CP48668 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6CP48668 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6CP48668 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6CP48668 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
KRT6CP48668 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
KRT6CP48668 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.75□□□□□ -0.05
KRT6CP48668 AC023908.3-201ENST00000564211 3047 ntBASIC14.75□□□□□ -0.05
KRT6CP48668 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
KRT6CP48668 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms