Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TM4SF4P48230 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM4SF4P48230 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TM4SF4P48230 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.82■□□□□ 0.28
TM4SF4P48230 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.82■□□□□ 0.28
TM4SF4P48230 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM4SF4P48230 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM4SF4P48230 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM4SF4P48230 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC16.82■□□□□ 0.28
TM4SF4P48230 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC16.82■□□□□ 0.28
TM4SF4P48230 HLA-DPA2-205ENST00000433582 733 ntBASIC16.82■□□□□ 0.28
TM4SF4P48230 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC16.82■□□□□ 0.28
TM4SF4P48230 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC16.82■□□□□ 0.28
TM4SF4P48230 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC16.82■□□□□ 0.28
TM4SF4P48230 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TM4SF4P48230 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC16.82■□□□□ 0.28
TM4SF4P48230 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC16.82■□□□□ 0.28
TM4SF4P48230 LINC00244-201ENST00000625073 613 ntBASIC16.82■□□□□ 0.28
TM4SF4P48230 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.82■□□□□ 0.28
TM4SF4P48230 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM4SF4P48230 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TM4SF4P48230 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TM4SF4P48230 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TM4SF4P48230 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM4SF4P48230 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM4SF4P48230 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.82■□□□□ 0.28
TM4SF4P48230 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM4SF4P48230 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TM4SF4P48230 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.81■□□□□ 0.28
TM4SF4P48230 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM4SF4P48230 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.81■□□□□ 0.28
TM4SF4P48230 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TM4SF4P48230 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
TM4SF4P48230 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.81■□□□□ 0.28
TM4SF4P48230 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TM4SF4P48230 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM4SF4P48230 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.81■□□□□ 0.28
TM4SF4P48230 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM4SF4P48230 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TM4SF4P48230 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.81■□□□□ 0.28
TM4SF4P48230 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM4SF4P48230 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.81■□□□□ 0.28
TM4SF4P48230 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.81■□□□□ 0.28
TM4SF4P48230 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM4SF4P48230 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM4SF4P48230 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TM4SF4P48230 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TM4SF4P48230 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TM4SF4P48230 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC16.81■□□□□ 0.28
TM4SF4P48230 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TM4SF4P48230 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TM4SF4P48230 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM4SF4P48230 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TM4SF4P48230 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.81■□□□□ 0.28
TM4SF4P48230 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC16.81■□□□□ 0.28
TM4SF4P48230 RNA5SP406-201ENST00000516106 112 ntBASIC16.81■□□□□ 0.28
TM4SF4P48230 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC16.81■□□□□ 0.28
TM4SF4P48230 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM4SF4P48230 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC16.81■□□□□ 0.28
TM4SF4P48230 GOLGA2P7-209ENST00000560408 745 ntBASIC16.81■□□□□ 0.28
TM4SF4P48230 MIR5001-201ENST00000580185 100 ntBASIC16.81■□□□□ 0.28
TM4SF4P48230 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TM4SF4P48230 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM4SF4P48230 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM4SF4P48230 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TM4SF4P48230 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.81■□□□□ 0.28
TM4SF4P48230 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TM4SF4P48230 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TM4SF4P48230 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.81■□□□□ 0.28
TM4SF4P48230 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM4SF4P48230 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.81■□□□□ 0.28
TM4SF4P48230 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM4SF4P48230 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.8■□□□□ 0.28
TM4SF4P48230 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.8■□□□□ 0.28
TM4SF4P48230 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
TM4SF4P48230 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TM4SF4P48230 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.8■□□□□ 0.28
TM4SF4P48230 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM4SF4P48230 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM4SF4P48230 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.8■□□□□ 0.28
TM4SF4P48230 AL136172.1-201ENST00000598590 1394 ntBASIC16.8■□□□□ 0.28
TM4SF4P48230 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TM4SF4P48230 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.8■□□□□ 0.28
TM4SF4P48230 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM4SF4P48230 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM4SF4P48230 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TM4SF4P48230 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM4SF4P48230 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TM4SF4P48230 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM4SF4P48230 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TM4SF4P48230 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TM4SF4P48230 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TM4SF4P48230 AC108734.2-201ENST00000420887 1069 ntBASIC16.8■□□□□ 0.28
TM4SF4P48230 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC16.8■□□□□ 0.28
TM4SF4P48230 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC16.8■□□□□ 0.28
TM4SF4P48230 KRT18P46-201ENST00000435568 1279 ntBASIC16.8■□□□□ 0.28
TM4SF4P48230 ST13P19-201ENST00000442505 1124 ntBASIC16.8■□□□□ 0.28
TM4SF4P48230 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.8■□□□□ 0.28
TM4SF4P48230 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC16.8■□□□□ 0.28
TM4SF4P48230 RBM4-207ENST00000506523 654 ntTSL 3 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms