Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NKX2-1P43699 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NKX2-1P43699 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NKX2-1P43699 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NKX2-1P43699 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-1P43699 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-1P43699 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
NKX2-1P43699 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-1P43699 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-1P43699 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
NKX2-1P43699 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NKX2-1P43699 AC089987.1-201ENST00000551654 2209 ntBASIC12.47□□□□□ -0.41
NKX2-1P43699 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.47□□□□□ -0.41
NKX2-1P43699 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.47□□□□□ -0.41
NKX2-1P43699 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX2-1P43699 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
NKX2-1P43699 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
NKX2-1P43699 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX2-1P43699 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX2-1P43699 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.47□□□□□ -0.41
NKX2-1P43699 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
NKX2-1P43699 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
NKX2-1P43699 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX2-1P43699 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
NKX2-1P43699 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
NKX2-1P43699 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.47□□□□□ -0.41
NKX2-1P43699 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX2-1P43699 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
NKX2-1P43699 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX2-1P43699 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX2-1P43699 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.47□□□□□ -0.41
NKX2-1P43699 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
NKX2-1P43699 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
NKX2-1P43699 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
NKX2-1P43699 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
NKX2-1P43699 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
NKX2-1P43699 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX2-1P43699 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.47□□□□□ -0.41
NKX2-1P43699 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.47□□□□□ -0.41
NKX2-1P43699 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
NKX2-1P43699 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
NKX2-1P43699 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX2-1P43699 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-1P43699 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-1P43699 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-1P43699 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
NKX2-1P43699 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
NKX2-1P43699 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
NKX2-1P43699 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.46□□□□□ -0.41
NKX2-1P43699 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-1P43699 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
NKX2-1P43699 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-1P43699 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-1P43699 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.46□□□□□ -0.41
NKX2-1P43699 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
NKX2-1P43699 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
NKX2-1P43699 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-1P43699 AL359183.1-201ENST00000623796 2132 ntBASIC12.46□□□□□ -0.41
NKX2-1P43699 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.46□□□□□ -0.41
NKX2-1P43699 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.46□□□□□ -0.41
NKX2-1P43699 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.46□□□□□ -0.41
NKX2-1P43699 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-1P43699 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
NKX2-1P43699 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-1P43699 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-1P43699 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-1P43699 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-1P43699 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
NKX2-1P43699 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.46□□□□□ -0.41
NKX2-1P43699 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.46□□□□□ -0.41
NKX2-1P43699 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.46□□□□□ -0.41
NKX2-1P43699 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-1P43699 AL135744.1-201ENST00000565098 629 ntBASIC12.46□□□□□ -0.41
NKX2-1P43699 Z83851.2-201ENST00000609564 659 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms