Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
CDKN2CP42773 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.36□□□□□ -0.11
CDKN2CP42773 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CDKN2CP42773 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.36□□□□□ -0.11
CDKN2CP42773 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CDKN2CP42773 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CDKN2CP42773 AC136759.1-202ENST00000530858 2194 ntBASIC14.36□□□□□ -0.11
CDKN2CP42773 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CDKN2CP42773 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDKN2CP42773 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDKN2CP42773 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKN2CP42773 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.35□□□□□ -0.11
CDKN2CP42773 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDKN2CP42773 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CDKN2CP42773 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKN2CP42773 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKN2CP42773 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKN2CP42773 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDKN2CP42773 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDKN2CP42773 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.35□□□□□ -0.11
CDKN2CP42773 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDKN2CP42773 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKN2CP42773 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKN2CP42773 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKN2CP42773 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDKN2CP42773 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDKN2CP42773 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.35□□□□□ -0.11
CDKN2CP42773 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.35□□□□□ -0.11
CDKN2CP42773 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.35□□□□□ -0.11
CDKN2CP42773 MEIS3P1-201ENST00000495167 958 ntBASIC14.35□□□□□ -0.11
CDKN2CP42773 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.35□□□□□ -0.11
CDKN2CP42773 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.35□□□□□ -0.11
CDKN2CP42773 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.35□□□□□ -0.11
CDKN2CP42773 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDKN2CP42773 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDKN2CP42773 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CDKN2CP42773 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKN2CP42773 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.35□□□□□ -0.11
CDKN2CP42773 AC093525.8-201ENST00000624099 1342 ntBASIC14.35□□□□□ -0.11
CDKN2CP42773 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKN2CP42773 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKN2CP42773 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.35□□□□□ -0.11
CDKN2CP42773 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKN2CP42773 AC104581.4-201ENST00000623126 3052 ntBASIC14.35□□□□□ -0.11
CDKN2CP42773 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDKN2CP42773 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKN2CP42773 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDKN2CP42773 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CDKN2CP42773 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKN2CP42773 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN2CP42773 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDKN2CP42773 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN2CP42773 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.34□□□□□ -0.11
CDKN2CP42773 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN2CP42773 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN2CP42773 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN2CP42773 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CDKN2CP42773 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.34□□□□□ -0.11
CDKN2CP42773 AL158070.2-201ENST00000623713 1621 ntBASIC14.34□□□□□ -0.11
CDKN2CP42773 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN2CP42773 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.34□□□□□ -0.11
CDKN2CP42773 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN2CP42773 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN2CP42773 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN2CP42773 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN2CP42773 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN2CP42773 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CDKN2CP42773 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CDKN2CP42773 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN2CP42773 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.34□□□□□ -0.11
CDKN2CP42773 MIR943-201ENST00000401286 94 ntBASIC14.34□□□□□ -0.11
CDKN2CP42773 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.34□□□□□ -0.11
CDKN2CP42773 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.34□□□□□ -0.11
CDKN2CP42773 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.34□□□□□ -0.11
CDKN2CP42773 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.34□□□□□ -0.11
CDKN2CP42773 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN2CP42773 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.34□□□□□ -0.11
CDKN2CP42773 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN2CP42773 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.34□□□□□ -0.11
CDKN2CP42773 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.34□□□□□ -0.11
CDKN2CP42773 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.34□□□□□ -0.11
CDKN2CP42773 AC004790.1-201ENST00000612686 536 ntBASIC14.34□□□□□ -0.11
CDKN2CP42773 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.34□□□□□ -0.11
CDKN2CP42773 AL691403.2-201ENST00000618460 490 ntBASIC14.34□□□□□ -0.11
CDKN2CP42773 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.34□□□□□ -0.11
CDKN2CP42773 AC004840.1-201ENST00000636359 365 ntBASIC14.34□□□□□ -0.11
CDKN2CP42773 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN2CP42773 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN2CP42773 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN2CP42773 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN2CP42773 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN2CP42773 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN2CP42773 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms