Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.38■□□□□ 0.05
HADHAP40939 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
HADHAP40939 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.38■□□□□ 0.05
HADHAP40939 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
HADHAP40939 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HADHAP40939 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.38■□□□□ 0.05
HADHAP40939 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HADHAP40939 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HADHAP40939 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.38■□□□□ 0.05
HADHAP40939 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HADHAP40939 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
HADHAP40939 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HADHAP40939 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.38■□□□□ 0.05
HADHAP40939 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HADHAP40939 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.38■□□□□ 0.05
HADHAP40939 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.38■□□□□ 0.05
HADHAP40939 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.38■□□□□ 0.05
HADHAP40939 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HADHAP40939 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HADHAP40939 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.37■□□□□ 0.05
HADHAP40939 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.37■□□□□ 0.05
HADHAP40939 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.37■□□□□ 0.05
HADHAP40939 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HADHAP40939 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HADHAP40939 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
HADHAP40939 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HADHAP40939 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.37■□□□□ 0.05
HADHAP40939 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HADHAP40939 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HADHAP40939 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HADHAP40939 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HADHAP40939 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HADHAP40939 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.37■□□□□ 0.05
HADHAP40939 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HADHAP40939 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
HADHAP40939 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HADHAP40939 AL645937.2-201ENST00000396808 931 ntBASIC15.37■□□□□ 0.05
HADHAP40939 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HADHAP40939 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.37■□□□□ 0.05
HADHAP40939 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.37■□□□□ 0.05
HADHAP40939 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.37■□□□□ 0.05
HADHAP40939 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.37■□□□□ 0.05
HADHAP40939 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.37■□□□□ 0.05
HADHAP40939 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.37■□□□□ 0.05
HADHAP40939 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.37■□□□□ 0.05
HADHAP40939 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.37■□□□□ 0.05
HADHAP40939 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.37■□□□□ 0.05
HADHAP40939 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.37■□□□□ 0.05
HADHAP40939 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.37■□□□□ 0.05
HADHAP40939 TMEM261P1-201ENST00000604899 340 ntBASIC15.37■□□□□ 0.05
HADHAP40939 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HADHAP40939 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HADHAP40939 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HADHAP40939 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HADHAP40939 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HADHAP40939 AL138799.1-201ENST00000448213 1675 ntBASIC15.37■□□□□ 0.05
HADHAP40939 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HADHAP40939 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HADHAP40939 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HADHAP40939 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
HADHAP40939 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HADHAP40939 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.37■□□□□ 0.05
HADHAP40939 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.37■□□□□ 0.05
HADHAP40939 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.37■□□□□ 0.05
HADHAP40939 GRK6P1-201ENST00000400595 1711 ntBASIC15.37■□□□□ 0.05
HADHAP40939 REXO1L4P-201ENST00000605109 1937 ntBASIC15.37■□□□□ 0.05
HADHAP40939 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HADHAP40939 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
HADHAP40939 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.36■□□□□ 0.05
HADHAP40939 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.36■□□□□ 0.05
HADHAP40939 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HADHAP40939 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HADHAP40939 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
HADHAP40939 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
HADHAP40939 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HADHAP40939 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.36■□□□□ 0.05
HADHAP40939 AC026748.1-201ENST00000624349 3251 ntBASIC15.36■□□□□ 0.05
HADHAP40939 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HADHAP40939 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
HADHAP40939 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HADHAP40939 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HADHAP40939 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HADHAP40939 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HADHAP40939 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.36■□□□□ 0.05
HADHAP40939 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HADHAP40939 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HADHAP40939 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
HADHAP40939 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.36■□□□□ 0.05
HADHAP40939 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.36■□□□□ 0.05
HADHAP40939 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HADHAP40939 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HADHAP40939 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
HADHAP40939 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.36■□□□□ 0.05
HADHAP40939 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HADHAP40939 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.36■□□□□ 0.05
HADHAP40939 NUS1P3-201ENST00000423502 862 ntBASIC15.36■□□□□ 0.05
HADHAP40939 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HADHAP40939 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.36■□□□□ 0.05
HADHAP40939 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.36■□□□□ 0.05
HADHAP40939 AC092552.1-201ENST00000547243 906 ntBASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms