Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP8P40818 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP8P40818 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.62■□□□□ 0.25
USP8P40818 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
USP8P40818 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP8P40818 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.62■□□□□ 0.25
USP8P40818 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
USP8P40818 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
USP8P40818 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP8P40818 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP8P40818 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP8P40818 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.62■□□□□ 0.25
USP8P40818 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP8P40818 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
USP8P40818 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
USP8P40818 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP8P40818 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
USP8P40818 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.61■□□□□ 0.25
USP8P40818 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP8P40818 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP8P40818 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.61■□□□□ 0.25
USP8P40818 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP8P40818 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP8P40818 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP8P40818 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.61■□□□□ 0.25
USP8P40818 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
USP8P40818 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP8P40818 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
USP8P40818 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
USP8P40818 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP8P40818 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP8P40818 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.61■□□□□ 0.25
USP8P40818 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.61■□□□□ 0.25
USP8P40818 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.61■□□□□ 0.25
USP8P40818 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
USP8P40818 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP8P40818 AC104794.3-201ENST00000566840 1248 ntBASIC16.61■□□□□ 0.25
USP8P40818 AC092337.1-201ENST00000568699 1129 ntBASIC16.61■□□□□ 0.25
USP8P40818 SRD5A3P1-201ENST00000603021 949 ntBASIC16.61■□□□□ 0.25
USP8P40818 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.61■□□□□ 0.25
USP8P40818 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
USP8P40818 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP8P40818 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.61■□□□□ 0.25
USP8P40818 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP8P40818 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP8P40818 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.61■□□□□ 0.25
USP8P40818 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
USP8P40818 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.61■□□□□ 0.25
USP8P40818 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
USP8P40818 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.61■□□□□ 0.25
USP8P40818 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP8P40818 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP8P40818 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
USP8P40818 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP8P40818 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC16.61■□□□□ 0.25
USP8P40818 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.6■□□□□ 0.25
USP8P40818 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
USP8P40818 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.6■□□□□ 0.25
USP8P40818 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.6■□□□□ 0.25
USP8P40818 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
USP8P40818 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
USP8P40818 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.6■□□□□ 0.25
USP8P40818 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.6■□□□□ 0.25
USP8P40818 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.6■□□□□ 0.25
USP8P40818 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
USP8P40818 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
USP8P40818 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 CYMP-203ENST00000474680 1263 ntBASIC16.6■□□□□ 0.25
USP8P40818 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.6■□□□□ 0.25
USP8P40818 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.6■□□□□ 0.25
USP8P40818 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.6■□□□□ 0.25
USP8P40818 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.6■□□□□ 0.25
USP8P40818 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.6■□□□□ 0.25
USP8P40818 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.6■□□□□ 0.25
USP8P40818 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
USP8P40818 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
USP8P40818 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.6■□□□□ 0.25
USP8P40818 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
USP8P40818 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms