Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC18.44■□□□□ 0.54
PDE6BP35913 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDE6BP35913 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDE6BP35913 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDE6BP35913 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDE6BP35913 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC18.44■□□□□ 0.54
PDE6BP35913 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDE6BP35913 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDE6BP35913 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6BP35913 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6BP35913 NKILA-202ENST00000614771 2598 ntBASIC18.43■□□□□ 0.54
PDE6BP35913 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6BP35913 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6BP35913 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6BP35913 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.43■□□□□ 0.54
PDE6BP35913 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6BP35913 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6BP35913 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6BP35913 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6BP35913 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6BP35913 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6BP35913 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
PDE6BP35913 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6BP35913 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6BP35913 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6BP35913 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PDE6BP35913 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PDE6BP35913 AL583805.1-201ENST00000391389 531 ntBASIC18.43■□□□□ 0.54
PDE6BP35913 AL645933.1-201ENST00000440087 609 ntBASIC18.43■□□□□ 0.54
PDE6BP35913 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6BP35913 KRT18P66-201ENST00000452970 1269 ntBASIC18.43■□□□□ 0.54
PDE6BP35913 CHCHD2P9-201ENST00000461726 456 ntBASIC18.43■□□□□ 0.54
PDE6BP35913 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6BP35913 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC18.43■□□□□ 0.54
PDE6BP35913 AC093752.3-201ENST00000567343 901 ntBASIC18.43■□□□□ 0.54
PDE6BP35913 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6BP35913 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC18.43■□□□□ 0.54
PDE6BP35913 MIR3188-201ENST00000583494 85 ntBASIC18.43■□□□□ 0.54
PDE6BP35913 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC18.43■□□□□ 0.54
PDE6BP35913 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PDE6BP35913 AC133540.1-201ENST00000620845 1019 ntBASIC18.43■□□□□ 0.54
PDE6BP35913 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC18.43■□□□□ 0.54
PDE6BP35913 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC18.43■□□□□ 0.54
PDE6BP35913 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.43■□□□□ 0.54
PDE6BP35913 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6BP35913 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6BP35913 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
PDE6BP35913 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PDE6BP35913 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.43■□□□□ 0.54
PDE6BP35913 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6BP35913 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6BP35913 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.43■□□□□ 0.54
PDE6BP35913 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6BP35913 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.42■□□□□ 0.54
PDE6BP35913 CICP13-201ENST00000422015 2789 ntBASIC18.42■□□□□ 0.54
PDE6BP35913 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
PDE6BP35913 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDE6BP35913 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDE6BP35913 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDE6BP35913 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDE6BP35913 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC18.42■□□□□ 0.54
PDE6BP35913 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDE6BP35913 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDE6BP35913 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDE6BP35913 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.42■□□□□ 0.54
PDE6BP35913 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDE6BP35913 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDE6BP35913 MBP-201ENST00000354542 575 ntTSL 2 BASIC18.42■□□□□ 0.54
PDE6BP35913 SOD2-202ENST00000367054 815 ntTSL 2 BASIC18.42■□□□□ 0.54
PDE6BP35913 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PDE6BP35913 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDE6BP35913 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.42■□□□□ 0.54
PDE6BP35913 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC18.42■□□□□ 0.54
PDE6BP35913 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
PDE6BP35913 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PDE6BP35913 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC18.42■□□□□ 0.54
PDE6BP35913 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDE6BP35913 RPL17P45-201ENST00000586289 509 ntBASIC18.42■□□□□ 0.54
PDE6BP35913 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.42■□□□□ 0.54
PDE6BP35913 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC18.42■□□□□ 0.54
PDE6BP35913 MIR6756-201ENST00000616240 63 ntBASIC18.42■□□□□ 0.54
PDE6BP35913 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PDE6BP35913 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDE6BP35913 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.42■□□□□ 0.54
PDE6BP35913 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PDE6BP35913 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDE6BP35913 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDE6BP35913 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PDE6BP35913 KRT18P9-201ENST00000604826 1300 ntBASIC18.42■□□□□ 0.54
PDE6BP35913 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PDE6BP35913 AC015909.3-201ENST00000572855 1794 ntBASIC18.42■□□□□ 0.54
PDE6BP35913 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
PDE6BP35913 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
PDE6BP35913 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PDE6BP35913 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDE6BP35913 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.42■□□□□ 0.54
PDE6BP35913 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PDE6BP35913 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.42■□□□□ 0.54
PDE6BP35913 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDE6BP35913 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms