Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASP1P29466 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.92■□□□□ 0.3
CASP1P29466 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASP1P29466 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASP1P29466 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
CASP1P29466 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.92■□□□□ 0.3
CASP1P29466 DFFBP1-201ENST00000433250 979 ntBASIC16.92■□□□□ 0.3
CASP1P29466 MYCLP2-201ENST00000449268 967 ntBASIC16.92■□□□□ 0.3
CASP1P29466 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.92■□□□□ 0.3
CASP1P29466 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.92■□□□□ 0.3
CASP1P29466 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASP1P29466 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.92■□□□□ 0.3
CASP1P29466 AC008494.3-201ENST00000606615 944 ntBASIC16.92■□□□□ 0.3
CASP1P29466 AC004233.3-201ENST00000607794 1269 ntBASIC16.92■□□□□ 0.3
CASP1P29466 BX539320.1-201ENST00000623759 877 ntBASIC16.92■□□□□ 0.3
CASP1P29466 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.92■□□□□ 0.3
CASP1P29466 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.92■□□□□ 0.3
CASP1P29466 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.92■□□□□ 0.3
CASP1P29466 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.92■□□□□ 0.3
CASP1P29466 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASP1P29466 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASP1P29466 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.92■□□□□ 0.3
CASP1P29466 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.92■□□□□ 0.3
CASP1P29466 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CASP1P29466 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.92■□□□□ 0.3
CASP1P29466 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.91■□□□□ 0.3
CASP1P29466 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
CASP1P29466 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.91■□□□□ 0.3
CASP1P29466 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.91■□□□□ 0.3
CASP1P29466 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.91■□□□□ 0.3
CASP1P29466 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CASP1P29466 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.91■□□□□ 0.3
CASP1P29466 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.91■□□□□ 0.3
CASP1P29466 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.91■□□□□ 0.3
CASP1P29466 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CASP1P29466 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.91■□□□□ 0.3
CASP1P29466 AC002472.2-201ENST00000442739 958 ntBASIC16.91■□□□□ 0.3
CASP1P29466 AC104596.2-201ENST00000512793 793 ntBASIC16.91■□□□□ 0.3
CASP1P29466 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.91■□□□□ 0.3
CASP1P29466 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.91■□□□□ 0.3
CASP1P29466 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.91■□□□□ 0.3
CASP1P29466 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.91■□□□□ 0.3
CASP1P29466 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.91■□□□□ 0.3
CASP1P29466 AC005252.2-201ENST00000624630 1141 ntBASIC16.91■□□□□ 0.3
CASP1P29466 PRSS30P-206ENST00000641773 873 ntBASIC16.91■□□□□ 0.3
CASP1P29466 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CASP1P29466 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.91■□□□□ 0.3
CASP1P29466 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CASP1P29466 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CASP1P29466 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP1P29466 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.91■□□□□ 0.3
CASP1P29466 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CASP1P29466 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASP1P29466 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CASP1P29466 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.9■□□□□ 0.3
CASP1P29466 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CASP1P29466 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.9■□□□□ 0.3
CASP1P29466 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.9■□□□□ 0.3
CASP1P29466 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASP1P29466 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CASP1P29466 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.9■□□□□ 0.3
CASP1P29466 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASP1P29466 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASP1P29466 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASP1P29466 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CASP1P29466 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.9■□□□□ 0.3
CASP1P29466 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CASP1P29466 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASP1P29466 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CASP1P29466 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CASP1P29466 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CASP1P29466 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CASP1P29466 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.9■□□□□ 0.3
CASP1P29466 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CASP1P29466 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms