Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP24386 AC138969.3-201ENST00000546612 1459 ntBASIC14.24□□□□□ -0.13
CHMP24386 AC138932.2-201ENST00000548268 1459 ntBASIC14.24□□□□□ -0.13
CHMP24386 AC126755.4-201ENST00000549796 1459 ntBASIC14.24□□□□□ -0.13
CHMP24386 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP24386 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CHMP24386 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP24386 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.24□□□□□ -0.13
CHMP24386 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.24□□□□□ -0.13
CHMP24386 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP24386 INTS4P1-203ENST00000641008 3683 ntBASIC14.23□□□□□ -0.13
CHMP24386 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.23□□□□□ -0.13
CHMP24386 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CHMP24386 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
CHMP24386 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.23□□□□□ -0.13
CHMP24386 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CHMP24386 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CHMP24386 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.23□□□□□ -0.13
CHMP24386 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CHMP24386 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CHMP24386 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.23□□□□□ -0.13
CHMP24386 AC098614.1-201ENST00000368528 745 ntBASIC14.23□□□□□ -0.13
CHMP24386 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.23□□□□□ -0.13
CHMP24386 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.23□□□□□ -0.13
CHMP24386 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.23□□□□□ -0.13
CHMP24386 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.23□□□□□ -0.13
CHMP24386 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
CHMP24386 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.23□□□□□ -0.13
CHMP24386 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
CHMP24386 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.23□□□□□ -0.13
CHMP24386 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.23□□□□□ -0.13
CHMP24386 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.23□□□□□ -0.13
CHMP24386 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.23□□□□□ -0.13
CHMP24386 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.23□□□□□ -0.13
CHMP24386 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.23□□□□□ -0.13
CHMP24386 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.23□□□□□ -0.13
CHMP24386 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CHMP24386 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
CHMP24386 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.23□□□□□ -0.13
CHMP24386 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.23□□□□□ -0.13
CHMP24386 AC005840.4-201ENST00000541242 2494 ntBASIC14.23□□□□□ -0.13
CHMP24386 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CHMP24386 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CHMP24386 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.23□□□□□ -0.13
CHMP24386 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP24386 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.23□□□□□ -0.13
CHMP24386 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CHMP24386 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.23□□□□□ -0.13
CHMP24386 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.22□□□□□ -0.13
CHMP24386 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP24386 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP24386 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP24386 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP24386 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.22□□□□□ -0.13
CHMP24386 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CHMP24386 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP24386 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP24386 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP24386 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP24386 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP24386 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP24386 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP24386 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CHMP24386 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.22□□□□□ -0.13
CHMP24386 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.22□□□□□ -0.13
CHMP24386 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP24386 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.22□□□□□ -0.13
CHMP24386 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.22□□□□□ -0.13
CHMP24386 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
CHMP24386 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CHMP24386 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.22□□□□□ -0.13
CHMP24386 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP24386 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.22□□□□□ -0.13
CHMP24386 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP24386 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms