Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
NFKB1P19838 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NFKB1P19838 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NFKB1P19838 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NFKB1P19838 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NFKB1P19838 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
NFKB1P19838 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.43■□□□□ 0.06
NFKB1P19838 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NFKB1P19838 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.43■□□□□ 0.06
NFKB1P19838 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.43■□□□□ 0.06
NFKB1P19838 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.43■□□□□ 0.06
NFKB1P19838 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
NFKB1P19838 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.42■□□□□ 0.06
NFKB1P19838 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NFKB1P19838 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.42■□□□□ 0.06
NFKB1P19838 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.42■□□□□ 0.06
NFKB1P19838 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
NFKB1P19838 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NFKB1P19838 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.42■□□□□ 0.06
NFKB1P19838 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NFKB1P19838 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
NFKB1P19838 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.42■□□□□ 0.06
NFKB1P19838 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.42■□□□□ 0.06
NFKB1P19838 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NFKB1P19838 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.42■□□□□ 0.06
NFKB1P19838 CRB3P1-201ENST00000449338 276 ntBASIC15.42■□□□□ 0.06
NFKB1P19838 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.42■□□□□ 0.06
NFKB1P19838 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.42■□□□□ 0.06
NFKB1P19838 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.42■□□□□ 0.06
NFKB1P19838 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.42■□□□□ 0.06
NFKB1P19838 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.42■□□□□ 0.06
NFKB1P19838 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NFKB1P19838 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NFKB1P19838 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.42■□□□□ 0.06
NFKB1P19838 AC140479.7-201ENST00000636301 2332 ntBASIC15.42■□□□□ 0.06
NFKB1P19838 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.42■□□□□ 0.06
NFKB1P19838 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
NFKB1P19838 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NFKB1P19838 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NFKB1P19838 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NFKB1P19838 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NFKB1P19838 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.41■□□□□ 0.06
NFKB1P19838 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.41■□□□□ 0.06
NFKB1P19838 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NFKB1P19838 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.41■□□□□ 0.06
NFKB1P19838 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NFKB1P19838 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.41■□□□□ 0.06
NFKB1P19838 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NFKB1P19838 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.41■□□□□ 0.06
NFKB1P19838 AL162726.2-201ENST00000438986 1017 ntBASIC15.41■□□□□ 0.06
NFKB1P19838 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.41■□□□□ 0.06
NFKB1P19838 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NFKB1P19838 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.41■□□□□ 0.06
NFKB1P19838 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.41■□□□□ 0.06
NFKB1P19838 ENPP7P5-201ENST00000541031 1031 ntBASIC15.41■□□□□ 0.06
NFKB1P19838 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.41■□□□□ 0.06
NFKB1P19838 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.41■□□□□ 0.06
NFKB1P19838 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.41■□□□□ 0.06
NFKB1P19838 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.41■□□□□ 0.06
NFKB1P19838 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NFKB1P19838 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NFKB1P19838 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NFKB1P19838 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.41■□□□□ 0.06
NFKB1P19838 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NFKB1P19838 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NFKB1P19838 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NFKB1P19838 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.41■□□□□ 0.06
NFKB1P19838 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms