Protein–RNA interactions for Protein: P05023

ATP1A1, Sodium/potassium-transporting ATPase subunit alpha-1, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1P05023 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ATP1A1P05023 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1A1P05023 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ATP1A1P05023 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.18■□□□□ 0.18
ATP1A1P05023 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1A1P05023 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1A1P05023 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1A1P05023 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1A1P05023 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.18■□□□□ 0.18
ATP1A1P05023 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1A1P05023 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1A1P05023 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ATP1A1P05023 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.17■□□□□ 0.18
ATP1A1P05023 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.17■□□□□ 0.18
ATP1A1P05023 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.17■□□□□ 0.18
ATP1A1P05023 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ATP1A1P05023 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 AL354702.1-201ENST00000442006 1960 ntBASIC16.17■□□□□ 0.18
ATP1A1P05023 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ATP1A1P05023 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.17■□□□□ 0.18
ATP1A1P05023 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.17■□□□□ 0.18
ATP1A1P05023 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.17■□□□□ 0.18
ATP1A1P05023 CNN2P2-201ENST00000443536 909 ntBASIC16.17■□□□□ 0.18
ATP1A1P05023 CNN2P3-201ENST00000450201 906 ntBASIC16.17■□□□□ 0.18
ATP1A1P05023 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.17■□□□□ 0.18
ATP1A1P05023 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.17■□□□□ 0.18
ATP1A1P05023 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.17■□□□□ 0.18
ATP1A1P05023 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.17■□□□□ 0.18
ATP1A1P05023 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ATP1A1P05023 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 MIR4453-201ENST00000584019 89 ntBASIC16.17■□□□□ 0.18
ATP1A1P05023 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.17■□□□□ 0.18
ATP1A1P05023 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 AC018529.1-201ENST00000613063 361 ntBASIC16.17■□□□□ 0.18
ATP1A1P05023 AL136317.3-201ENST00000618497 906 ntBASIC16.17■□□□□ 0.18
ATP1A1P05023 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.17■□□□□ 0.18
ATP1A1P05023 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
ATP1A1P05023 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ATP1A1P05023 TUBB3P1-201ENST00000405796 1332 ntBASIC16.17■□□□□ 0.18
ATP1A1P05023 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
ATP1A1P05023 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1A1P05023 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATP1A1P05023 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATP1A1P05023 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP1A1P05023 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP1A1P05023 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATP1A1P05023 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP1A1P05023 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP1A1P05023 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP1A1P05023 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ATP1A1P05023 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP1A1P05023 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATP1A1P05023 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP1A1P05023 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP1A1P05023 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP1A1P05023 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP1A1P05023 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP1A1P05023 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP1A1P05023 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP1A1P05023 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP1A1P05023 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATP1A1P05023 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ATP1A1P05023 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP1A1P05023 SPDYE7P-202ENST00000420373 878 ntBASIC16.16■□□□□ 0.18
ATP1A1P05023 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP1A1P05023 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP1A1P05023 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATP1A1P05023 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
ATP1A1P05023 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.16■□□□□ 0.18
ATP1A1P05023 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP1A1P05023 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP1A1P05023 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP1A1P05023 RN7SL828P-201ENST00000607615 303 ntBASIC16.16■□□□□ 0.18
ATP1A1P05023 AC003101.2-201ENST00000612557 442 ntBASIC16.16■□□□□ 0.18
ATP1A1P05023 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.16■□□□□ 0.18
ATP1A1P05023 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP1A1P05023 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP1A1P05023 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP1A1P05023 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms