Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 AF186996.4-201ENST00000467186 377 ntBASIC16.27■□□□□ 0.2
TUBB4AP04350 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TUBB4AP04350 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.27■□□□□ 0.2
TUBB4AP04350 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.27■□□□□ 0.2
TUBB4AP04350 SLC25A6P4-201ENST00000586535 553 ntBASIC16.27■□□□□ 0.2
TUBB4AP04350 AC027307.2-201ENST00000591252 911 ntBASIC16.27■□□□□ 0.2
TUBB4AP04350 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.27■□□□□ 0.2
TUBB4AP04350 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TUBB4AP04350 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TUBB4AP04350 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TUBB4AP04350 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TUBB4AP04350 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
TUBB4AP04350 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TUBB4AP04350 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TUBB4AP04350 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.27■□□□□ 0.19
TUBB4AP04350 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TUBB4AP04350 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC16.27■□□□□ 0.19
TUBB4AP04350 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
TUBB4AP04350 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TUBB4AP04350 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC16.27■□□□□ 0.19
TUBB4AP04350 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TUBB4AP04350 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TUBB4AP04350 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TUBB4AP04350 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.26■□□□□ 0.19
TUBB4AP04350 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TUBB4AP04350 FAM197Y8-203ENST00000450145 560 ntBASIC16.26■□□□□ 0.19
TUBB4AP04350 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TUBB4AP04350 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.26■□□□□ 0.19
TUBB4AP04350 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.26■□□□□ 0.19
TUBB4AP04350 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.26■□□□□ 0.19
TUBB4AP04350 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.26■□□□□ 0.19
TUBB4AP04350 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
TUBB4AP04350 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC16.26■□□□□ 0.19
TUBB4AP04350 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC16.26■□□□□ 0.19
TUBB4AP04350 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.26■□□□□ 0.19
TUBB4AP04350 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
TUBB4AP04350 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.26■□□□□ 0.19
TUBB4AP04350 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.26■□□□□ 0.19
TUBB4AP04350 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBB4AP04350 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC16.26■□□□□ 0.19
TUBB4AP04350 AC068760.1-201ENST00000493579 1953 ntBASIC16.26■□□□□ 0.19
TUBB4AP04350 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBB4AP04350 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TUBB4AP04350 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TUBB4AP04350 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TUBB4AP04350 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBB4AP04350 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBB4AP04350 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC16.25■□□□□ 0.19
TUBB4AP04350 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBB4AP04350 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBB4AP04350 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBB4AP04350 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBB4AP04350 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TUBB4AP04350 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBB4AP04350 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TUBB4AP04350 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBB4AP04350 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBB4AP04350 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.25■□□□□ 0.19
TUBB4AP04350 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TUBB4AP04350 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBB4AP04350 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.25■□□□□ 0.19
TUBB4AP04350 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TUBB4AP04350 AC018712.1-201ENST00000455767 687 ntBASIC16.25■□□□□ 0.19
TUBB4AP04350 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.25■□□□□ 0.19
TUBB4AP04350 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.25■□□□□ 0.19
TUBB4AP04350 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.25■□□□□ 0.19
TUBB4AP04350 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TUBB4AP04350 AL773604.1-201ENST00000617417 272 ntBASIC16.25■□□□□ 0.19
TUBB4AP04350 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.25■□□□□ 0.19
TUBB4AP04350 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.25■□□□□ 0.19
TUBB4AP04350 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBB4AP04350 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBB4AP04350 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBB4AP04350 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBB4AP04350 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms