Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DRAP01903 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DRAP01903 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DRAP01903 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DRAP01903 AC018665.1-201ENST00000622927 1362 ntBASIC16.27■□□□□ 0.2
HLA-DRAP01903 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DRAP01903 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DRAP01903 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DRAP01903 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DRAP01903 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HLA-DRAP01903 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DRAP01903 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DRAP01903 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DRAP01903 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DRAP01903 AC018529.2-202ENST00000611482 3087 ntBASIC16.27■□□□□ 0.2
HLA-DRAP01903 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DRAP01903 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DRAP01903 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DRAP01903 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DRAP01903 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DRAP01903 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HLA-DRAP01903 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DRAP01903 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DRAP01903 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.27■□□□□ 0.2
HLA-DRAP01903 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DRAP01903 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DRAP01903 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.27■□□□□ 0.2
HLA-DRAP01903 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DRAP01903 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DRAP01903 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HLA-DRAP01903 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DRAP01903 PCDHA3-202ENST00000532566 4594 ntBASIC16.27■□□□□ 0.2
HLA-DRAP01903 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DRAP01903 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
HLA-DRAP01903 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
HLA-DRAP01903 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
HLA-DRAP01903 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DRAP01903 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DRAP01903 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.27■□□□□ 0.19
HLA-DRAP01903 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DRAP01903 AL513477.1-201ENST00000602865 2407 ntBASIC16.27■□□□□ 0.19
HLA-DRAP01903 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DRAP01903 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DRAP01903 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DRAP01903 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.27■□□□□ 0.19
HLA-DRAP01903 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DRAP01903 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
HLA-DRAP01903 AC018442.1-201ENST00000421439 2061 ntBASIC16.26■□□□□ 0.19
HLA-DRAP01903 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DRAP01903 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DRAP01903 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DRAP01903 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DRAP01903 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.26■□□□□ 0.19
HLA-DRAP01903 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 FO681548.1-201ENST00000455617 1132 ntBASIC16.26■□□□□ 0.19
HLA-DRAP01903 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DRAP01903 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DRAP01903 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DRAP01903 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DRAP01903 AL022328.1-201ENST00000610050 478 ntBASIC16.26■□□□□ 0.19
HLA-DRAP01903 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
HLA-DRAP01903 AC106881.1-201ENST00000605849 3329 ntBASIC16.26■□□□□ 0.19
HLA-DRAP01903 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DRAP01903 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRAP01903 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DRAP01903 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HLA-DRAP01903 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DRAP01903 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DRAP01903 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DRAP01903 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DRAP01903 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DRAP01903 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DRAP01903 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DRAP01903 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DRAP01903 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DRAP01903 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DRAP01903 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.25■□□□□ 0.19
HLA-DRAP01903 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms