Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 CR383656.12-201ENST00000549567 513 ntBASIC11.73□□□□□ -0.53
TRBV12-3P01733 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 RPS15-205ENST00000586686 562 ntTSL 5 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 RPS15-208ENST00000591804 711 ntTSL 5 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 AC007686.3-201ENST00000619017 3487 ntBASIC11.73□□□□□ -0.53
TRBV12-3P01733 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 AC018665.1-201ENST00000622927 1362 ntBASIC11.73□□□□□ -0.53
TRBV12-3P01733 AC006058.4-201ENST00000624016 1670 ntBASIC11.73□□□□□ -0.53
TRBV12-3P01733 AC055811.4-201ENST00000624039 1754 ntBASIC11.73□□□□□ -0.53
TRBV12-3P01733 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 AC103702.1-201ENST00000548801 2630 ntBASIC11.73□□□□□ -0.53
TRBV12-3P01733 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 AL355864.2-201ENST00000447420 863 ntBASIC11.72□□□□□ -0.53
TRBV12-3P01733 CROCCP4-201ENST00000457096 498 ntBASIC11.72□□□□□ -0.53
TRBV12-3P01733 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 NAA50-208ENST00000497255 789 ntTSL 5 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 AC233724.13-201ENST00000598383 410 ntBASIC11.72□□□□□ -0.53
TRBV12-3P01733 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 AC145423.3-201ENST00000615987 467 ntBASIC11.72□□□□□ -0.53
TRBV12-3P01733 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms