Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TNFP01375 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.72□□□□□ -0.05
TNFP01375 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TNFP01375 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.72□□□□□ -0.05
TNFP01375 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.72□□□□□ -0.05
TNFP01375 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.72□□□□□ -0.05
TNFP01375 AL354877.1-201ENST00000424412 413 ntBASIC14.72□□□□□ -0.05
TNFP01375 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.72□□□□□ -0.05
TNFP01375 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.72□□□□□ -0.05
TNFP01375 AC021723.1-201ENST00000486306 515 ntBASIC14.72□□□□□ -0.05
TNFP01375 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.72□□□□□ -0.05
TNFP01375 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.72□□□□□ -0.05
TNFP01375 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.72□□□□□ -0.05
TNFP01375 MIR4683-201ENST00000579659 81 ntBASIC14.72□□□□□ -0.05
TNFP01375 AC020914.3-201ENST00000594712 304 ntBASIC14.72□□□□□ -0.05
TNFP01375 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.72□□□□□ -0.05
TNFP01375 AC138696.2-201ENST00000607376 223 ntBASIC14.72□□□□□ -0.05
TNFP01375 AL136301.1-201ENST00000615830 422 ntBASIC14.72□□□□□ -0.05
TNFP01375 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TNFP01375 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.72□□□□□ -0.05
TNFP01375 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.72□□□□□ -0.05
TNFP01375 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.72□□□□□ -0.05
TNFP01375 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TNFP01375 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
TNFP01375 PAUPAR-201ENST00000630360 2965 ntBASIC14.72□□□□□ -0.05
TNFP01375 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.72□□□□□ -0.05
TNFP01375 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TNFP01375 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TNFP01375 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.71□□□□□ -0.05
TNFP01375 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TNFP01375 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TNFP01375 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TNFP01375 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TNFP01375 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TNFP01375 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TNFP01375 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TNFP01375 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.71□□□□□ -0.05
TNFP01375 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.71□□□□□ -0.05
TNFP01375 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.71□□□□□ -0.05
TNFP01375 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TNFP01375 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.71□□□□□ -0.05
TNFP01375 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TNFP01375 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TNFP01375 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TNFP01375 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.71□□□□□ -0.05
TNFP01375 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TNFP01375 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.71□□□□□ -0.05
TNFP01375 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TNFP01375 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TNFP01375 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.71□□□□□ -0.05
TNFP01375 AKR7A2P1-201ENST00000460134 915 ntBASIC14.71□□□□□ -0.05
TNFP01375 AC091804.1-201ENST00000486888 567 ntBASIC14.71□□□□□ -0.05
TNFP01375 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TNFP01375 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TNFP01375 AL023803.2-201ENST00000620080 638 ntBASIC14.71□□□□□ -0.05
TNFP01375 AL139099.5-201ENST00000635274 300 ntBASIC14.71□□□□□ -0.05
TNFP01375 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TNFP01375 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.71□□□□□ -0.05
TNFP01375 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.71□□□□□ -0.05
TNFP01375 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TNFP01375 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.71□□□□□ -0.05
TNFP01375 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TNFP01375 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TNFP01375 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TNFP01375 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.71□□□□□ -0.05
TNFP01375 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.71□□□□□ -0.06
TNFP01375 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TNFP01375 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TNFP01375 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TNFP01375 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.71□□□□□ -0.06
TNFP01375 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
TNFP01375 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TNFP01375 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TNFP01375 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.7□□□□□ -0.06
TNFP01375 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TNFP01375 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TNFP01375 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TNFP01375 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TNFP01375 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TNFP01375 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms