Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CLPXO76031 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CLPXO76031 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLPXO76031 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.86□□□□□ -0.19
CLPXO76031 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.86□□□□□ -0.19
CLPXO76031 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CLPXO76031 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLPXO76031 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CLPXO76031 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLPXO76031 AL118506.1-201ENST00000601296 3082 ntBASIC13.86□□□□□ -0.19
CLPXO76031 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLPXO76031 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CLPXO76031 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
CLPXO76031 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.86□□□□□ -0.19
CLPXO76031 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLPXO76031 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLPXO76031 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLPXO76031 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLPXO76031 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLPXO76031 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.86□□□□□ -0.19
CLPXO76031 CRYGEP-201ENST00000412192 528 ntBASIC13.86□□□□□ -0.19
CLPXO76031 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.86□□□□□ -0.19
CLPXO76031 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.86□□□□□ -0.19
CLPXO76031 AC004967.1-201ENST00000453589 447 ntBASIC13.86□□□□□ -0.19
CLPXO76031 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.86□□□□□ -0.19
CLPXO76031 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.86□□□□□ -0.19
CLPXO76031 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.86□□□□□ -0.19
CLPXO76031 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.86□□□□□ -0.19
CLPXO76031 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.86□□□□□ -0.19
CLPXO76031 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.86□□□□□ -0.19
CLPXO76031 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLPXO76031 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLPXO76031 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLPXO76031 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.86□□□□□ -0.19
CLPXO76031 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLPXO76031 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
CLPXO76031 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.86□□□□□ -0.19
CLPXO76031 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.86□□□□□ -0.19
CLPXO76031 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLPXO76031 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CLPXO76031 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLPXO76031 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.86□□□□□ -0.19
CLPXO76031 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLPXO76031 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
CLPXO76031 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLPXO76031 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.86□□□□□ -0.19
CLPXO76031 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.85□□□□□ -0.19
CLPXO76031 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 AC016397.2-201ENST00000624848 1985 ntBASIC13.85□□□□□ -0.19
CLPXO76031 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.85□□□□□ -0.19
CLPXO76031 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.85□□□□□ -0.19
CLPXO76031 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.85□□□□□ -0.19
CLPXO76031 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.85□□□□□ -0.19
CLPXO76031 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CLPXO76031 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.85□□□□□ -0.19
CLPXO76031 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
CLPXO76031 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.85□□□□□ -0.19
CLPXO76031 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CLPXO76031 PMS2P2-201ENST00000425039 1128 ntBASIC13.85□□□□□ -0.19
CLPXO76031 AC007967.2-201ENST00000432613 625 ntBASIC13.85□□□□□ -0.19
CLPXO76031 VN2R19P-201ENST00000442399 1052 ntBASIC13.85□□□□□ -0.19
CLPXO76031 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 TPT1P11-201ENST00000458482 498 ntBASIC13.85□□□□□ -0.19
CLPXO76031 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.85□□□□□ -0.19
CLPXO76031 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.85□□□□□ -0.19
CLPXO76031 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.85□□□□□ -0.19
CLPXO76031 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CLPXO76031 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.85□□□□□ -0.19
CLPXO76031 OR7E47P-204ENST00000575924 449 ntBASIC13.85□□□□□ -0.19
CLPXO76031 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.85□□□□□ -0.19
CLPXO76031 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.85□□□□□ -0.19
CLPXO76031 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.85□□□□□ -0.19
CLPXO76031 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.85□□□□□ -0.19
CLPXO76031 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CLPXO76031 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.85□□□□□ -0.19
CLPXO76031 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.85□□□□□ -0.19
CLPXO76031 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CLPXO76031 CICP16-201ENST00000502609 2813 ntBASIC13.85□□□□□ -0.19
CLPXO76031 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms