Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
GPC4O75487 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
GPC4O75487 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.28■□□□□ 0.04
GPC4O75487 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GPC4O75487 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GPC4O75487 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GPC4O75487 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GPC4O75487 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GPC4O75487 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GPC4O75487 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GPC4O75487 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.27■□□□□ 0.04
GPC4O75487 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GPC4O75487 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GPC4O75487 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.27■□□□□ 0.04
GPC4O75487 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GPC4O75487 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GPC4O75487 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
GPC4O75487 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
GPC4O75487 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.27■□□□□ 0.04
GPC4O75487 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GPC4O75487 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
GPC4O75487 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GPC4O75487 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.27■□□□□ 0.04
GPC4O75487 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GPC4O75487 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GPC4O75487 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.27■□□□□ 0.04
GPC4O75487 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
GPC4O75487 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.27■□□□□ 0.04
GPC4O75487 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.27■□□□□ 0.04
GPC4O75487 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.27■□□□□ 0.04
GPC4O75487 AC093004.1-201ENST00000508850 424 ntBASIC15.27■□□□□ 0.04
GPC4O75487 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.27■□□□□ 0.04
GPC4O75487 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GPC4O75487 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.27■□□□□ 0.04
GPC4O75487 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.27■□□□□ 0.04
GPC4O75487 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.27■□□□□ 0.04
GPC4O75487 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GPC4O75487 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
GPC4O75487 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GPC4O75487 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.27■□□□□ 0.03
GPC4O75487 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GPC4O75487 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
GPC4O75487 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GPC4O75487 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
GPC4O75487 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GPC4O75487 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
GPC4O75487 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.27■□□□□ 0.03
GPC4O75487 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GPC4O75487 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GPC4O75487 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GPC4O75487 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
GPC4O75487 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GPC4O75487 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
GPC4O75487 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GPC4O75487 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GPC4O75487 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GPC4O75487 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.26■□□□□ 0.03
GPC4O75487 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.26■□□□□ 0.03
GPC4O75487 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.26■□□□□ 0.03
GPC4O75487 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.26■□□□□ 0.03
GPC4O75487 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GPC4O75487 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GPC4O75487 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GPC4O75487 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GPC4O75487 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GPC4O75487 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.26■□□□□ 0.03
GPC4O75487 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GPC4O75487 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GPC4O75487 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
GPC4O75487 ZBED1P1-201ENST00000502364 1930 ntBASIC15.26■□□□□ 0.03
GPC4O75487 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
GPC4O75487 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GPC4O75487 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
GPC4O75487 AC002472.2-201ENST00000442739 958 ntBASIC15.26■□□□□ 0.03
GPC4O75487 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GPC4O75487 RN7SL399P-201ENST00000471648 279 ntBASIC15.26■□□□□ 0.03
GPC4O75487 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.26■□□□□ 0.03
GPC4O75487 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.26■□□□□ 0.03
GPC4O75487 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GPC4O75487 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GPC4O75487 RRP7BP-205ENST00000566851 833 ntBASIC15.26■□□□□ 0.03
GPC4O75487 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.26■□□□□ 0.03
GPC4O75487 MIR4745-201ENST00000577608 62 ntBASIC15.26■□□□□ 0.03
GPC4O75487 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GPC4O75487 AC099568.2-201ENST00000609194 695 ntBASIC15.26■□□□□ 0.03
GPC4O75487 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GPC4O75487 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.26■□□□□ 0.03
GPC4O75487 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GPC4O75487 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
GPC4O75487 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15.26■□□□□ 0.03
GPC4O75487 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GPC4O75487 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GPC4O75487 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GPC4O75487 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
GPC4O75487 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GPC4O75487 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms