Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
ZNF253O75346 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
ZNF253O75346 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZNF253O75346 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
ZNF253O75346 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZNF253O75346 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC11.9□□□□□ -0.5
ZNF253O75346 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC11.9□□□□□ -0.5
ZNF253O75346 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
ZNF253O75346 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZNF253O75346 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZNF253O75346 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZNF253O75346 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC11.9□□□□□ -0.5
ZNF253O75346 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
ZNF253O75346 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZNF253O75346 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
ZNF253O75346 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZNF253O75346 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ZNF253O75346 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZNF253O75346 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
ZNF253O75346 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ZNF253O75346 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.9□□□□□ -0.5
ZNF253O75346 AL353705.2-201ENST00000428243 662 ntBASIC11.9□□□□□ -0.5
ZNF253O75346 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ZNF253O75346 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC11.9□□□□□ -0.5
ZNF253O75346 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
ZNF253O75346 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC11.9□□□□□ -0.5
ZNF253O75346 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.9□□□□□ -0.5
ZNF253O75346 AC079140.1-201ENST00000508039 487 ntBASIC11.9□□□□□ -0.5
ZNF253O75346 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC11.9□□□□□ -0.5
ZNF253O75346 AC084364.1-201ENST00000551967 1556 ntBASIC11.9□□□□□ -0.5
ZNF253O75346 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC11.9□□□□□ -0.5
ZNF253O75346 RARRES2P9-201ENST00000565168 469 ntBASIC11.9□□□□□ -0.5
ZNF253O75346 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC11.9□□□□□ -0.5
ZNF253O75346 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC11.9□□□□□ -0.5
ZNF253O75346 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ZNF253O75346 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC11.9□□□□□ -0.5
ZNF253O75346 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC11.9□□□□□ -0.5
ZNF253O75346 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC11.9□□□□□ -0.5
ZNF253O75346 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZNF253O75346 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC11.9□□□□□ -0.5
ZNF253O75346 AP3S2-216ENST00000617003 1561 ntBASIC11.9□□□□□ -0.5
ZNF253O75346 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
ZNF253O75346 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZNF253O75346 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ZNF253O75346 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC11.9□□□□□ -0.5
ZNF253O75346 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ZNF253O75346 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
ZNF253O75346 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC11.9□□□□□ -0.5
ZNF253O75346 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC11.9□□□□□ -0.5
ZNF253O75346 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
ZNF253O75346 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZNF253O75346 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZNF253O75346 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZNF253O75346 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.9□□□□□ -0.5
ZNF253O75346 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.9□□□□□ -0.5
ZNF253O75346 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC11.9□□□□□ -0.5
ZNF253O75346 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
ZNF253O75346 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC11.9□□□□□ -0.51
ZNF253O75346 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.51
ZNF253O75346 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
ZNF253O75346 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
ZNF253O75346 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
ZNF253O75346 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC11.89□□□□□ -0.51
ZNF253O75346 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC11.89□□□□□ -0.51
ZNF253O75346 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.89□□□□□ -0.51
ZNF253O75346 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC11.89□□□□□ -0.51
ZNF253O75346 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC11.89□□□□□ -0.51
ZNF253O75346 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC11.89□□□□□ -0.51
ZNF253O75346 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC11.89□□□□□ -0.51
ZNF253O75346 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
ZNF253O75346 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC11.89□□□□□ -0.51
ZNF253O75346 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
ZNF253O75346 AZGP1P1-201ENST00000411909 902 ntBASIC11.89□□□□□ -0.51
ZNF253O75346 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC11.89□□□□□ -0.51
ZNF253O75346 GHSR-202ENST00000427970 912 ntBASIC11.89□□□□□ -0.51
ZNF253O75346 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC11.89□□□□□ -0.51
ZNF253O75346 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC11.89□□□□□ -0.51
ZNF253O75346 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms