Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
PDE6DO43924 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11.79□□□□□ -0.52
PDE6DO43924 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.79□□□□□ -0.52
PDE6DO43924 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
PDE6DO43924 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
PDE6DO43924 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
PDE6DO43924 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.79□□□□□ -0.52
PDE6DO43924 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC11.79□□□□□ -0.52
PDE6DO43924 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC11.79□□□□□ -0.52
PDE6DO43924 AC140658.5-201ENST00000438532 169 ntBASIC11.79□□□□□ -0.52
PDE6DO43924 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC11.79□□□□□ -0.52
PDE6DO43924 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.79□□□□□ -0.52
PDE6DO43924 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC11.79□□□□□ -0.52
PDE6DO43924 AC105233.2-201ENST00000523697 349 ntBASIC11.79□□□□□ -0.52
PDE6DO43924 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC11.79□□□□□ -0.52
PDE6DO43924 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC11.79□□□□□ -0.52
PDE6DO43924 AF228730.5-201ENST00000530288 346 ntBASIC11.79□□□□□ -0.52
PDE6DO43924 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC11.79□□□□□ -0.52
PDE6DO43924 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC11.79□□□□□ -0.52
PDE6DO43924 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.79□□□□□ -0.52
PDE6DO43924 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC11.79□□□□□ -0.52
PDE6DO43924 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC11.79□□□□□ -0.52
PDE6DO43924 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC11.79□□□□□ -0.52
PDE6DO43924 NPAP1P7-201ENST00000613027 823 ntBASIC11.79□□□□□ -0.52
PDE6DO43924 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC11.79□□□□□ -0.52
PDE6DO43924 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC11.79□□□□□ -0.52
PDE6DO43924 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
PDE6DO43924 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC11.79□□□□□ -0.52
PDE6DO43924 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC11.79□□□□□ -0.52
PDE6DO43924 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
PDE6DO43924 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC11.79□□□□□ -0.52
PDE6DO43924 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
PDE6DO43924 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC11.79□□□□□ -0.52
PDE6DO43924 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
PDE6DO43924 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 IER3-202ENST00000376377 1350 ntBASIC11.79□□□□□ -0.52
PDE6DO43924 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 AGGF1P1-201ENST00000509500 2073 ntBASIC11.79□□□□□ -0.52
PDE6DO43924 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC11.79□□□□□ -0.52
PDE6DO43924 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
PDE6DO43924 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.78□□□□□ -0.52
PDE6DO43924 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PDE6DO43924 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PDE6DO43924 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PDE6DO43924 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PDE6DO43924 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PDE6DO43924 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PDE6DO43924 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.78□□□□□ -0.52
PDE6DO43924 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PDE6DO43924 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
PDE6DO43924 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
PDE6DO43924 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PDE6DO43924 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PDE6DO43924 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PDE6DO43924 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
PDE6DO43924 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
PDE6DO43924 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC11.78□□□□□ -0.52
PDE6DO43924 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
PDE6DO43924 INIP-202ENST00000374236 874 ntTSL 2 BASIC11.78□□□□□ -0.52
PDE6DO43924 METTL26-205ENST00000397666 726 ntTSL 2 BASIC11.78□□□□□ -0.52
PDE6DO43924 FALEC-201ENST00000416894 566 ntTSL 3 BASIC11.78□□□□□ -0.52
PDE6DO43924 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.78□□□□□ -0.52
PDE6DO43924 PCED1CP-201ENST00000419887 785 ntBASIC11.78□□□□□ -0.52
PDE6DO43924 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC11.78□□□□□ -0.52
PDE6DO43924 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PDE6DO43924 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC11.78□□□□□ -0.52
PDE6DO43924 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC11.78□□□□□ -0.52
PDE6DO43924 NMU-203ENST00000507338 658 ntTSL 3 BASIC11.78□□□□□ -0.52
PDE6DO43924 FOSL1P1-201ENST00000511041 816 ntBASIC11.78□□□□□ -0.52
PDE6DO43924 RNA5SP410-201ENST00000516285 106 ntBASIC11.78□□□□□ -0.52
PDE6DO43924 MAL2-202ENST00000531508 892 ntTSL 3 BASIC11.78□□□□□ -0.52
PDE6DO43924 RPS29-206ENST00000557111 488 ntTSL 2 BASIC11.78□□□□□ -0.52
PDE6DO43924 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC11.78□□□□□ -0.52
PDE6DO43924 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
PDE6DO43924 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms