Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.53□□□□□ -0.08
PRICKLE3O43900 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PRICKLE3O43900 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PRICKLE3O43900 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.53□□□□□ -0.08
PRICKLE3O43900 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.53□□□□□ -0.08
PRICKLE3O43900 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.53□□□□□ -0.08
PRICKLE3O43900 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
PRICKLE3O43900 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.53□□□□□ -0.08
PRICKLE3O43900 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PRICKLE3O43900 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PRICKLE3O43900 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.52□□□□□ -0.08
PRICKLE3O43900 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRICKLE3O43900 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRICKLE3O43900 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.52□□□□□ -0.08
PRICKLE3O43900 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRICKLE3O43900 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
PRICKLE3O43900 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.52□□□□□ -0.08
PRICKLE3O43900 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.52□□□□□ -0.08
PRICKLE3O43900 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRICKLE3O43900 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.52□□□□□ -0.08
PRICKLE3O43900 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRICKLE3O43900 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRICKLE3O43900 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.52□□□□□ -0.08
PRICKLE3O43900 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PRICKLE3O43900 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PRICKLE3O43900 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.52□□□□□ -0.08
PRICKLE3O43900 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRICKLE3O43900 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PRICKLE3O43900 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRICKLE3O43900 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRICKLE3O43900 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.52□□□□□ -0.08
PRICKLE3O43900 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PRICKLE3O43900 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRICKLE3O43900 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRICKLE3O43900 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRICKLE3O43900 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 TPM3P8-201ENST00000330554 643 ntBASIC14.52□□□□□ -0.09
PRICKLE3O43900 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 AC026954.1-201ENST00000429771 1293 ntBASIC14.52□□□□□ -0.09
PRICKLE3O43900 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.52□□□□□ -0.09
PRICKLE3O43900 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.52□□□□□ -0.09
PRICKLE3O43900 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.52□□□□□ -0.09
PRICKLE3O43900 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.52□□□□□ -0.09
PRICKLE3O43900 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.52□□□□□ -0.09
PRICKLE3O43900 AP005482.1-201ENST00000563722 1273 ntBASIC14.52□□□□□ -0.09
PRICKLE3O43900 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.52□□□□□ -0.09
PRICKLE3O43900 COX11-210ENST00000639671 696 ntBASIC14.52□□□□□ -0.09
PRICKLE3O43900 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.52□□□□□ -0.09
PRICKLE3O43900 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
PRICKLE3O43900 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PRICKLE3O43900 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.52□□□□□ -0.09
PRICKLE3O43900 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.52□□□□□ -0.09
PRICKLE3O43900 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRICKLE3O43900 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.51□□□□□ -0.09
PRICKLE3O43900 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PRICKLE3O43900 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.51□□□□□ -0.09
PRICKLE3O43900 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
PRICKLE3O43900 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PRICKLE3O43900 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRICKLE3O43900 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
PRICKLE3O43900 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.51□□□□□ -0.09
PRICKLE3O43900 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRICKLE3O43900 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PRICKLE3O43900 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRICKLE3O43900 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PRICKLE3O43900 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PRICKLE3O43900 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.51□□□□□ -0.09
PRICKLE3O43900 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.51□□□□□ -0.09
PRICKLE3O43900 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PRICKLE3O43900 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms