Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 BX640514.1-201ENST00000583223 1918 ntBASIC13.87□□□□□ -0.19
RNF13O43567 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF13O43567 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNF13O43567 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNF13O43567 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.87□□□□□ -0.19
RNF13O43567 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.87□□□□□ -0.19
RNF13O43567 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
RNF13O43567 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNF13O43567 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF13O43567 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF13O43567 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF13O43567 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF13O43567 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.87□□□□□ -0.19
RNF13O43567 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF13O43567 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.86□□□□□ -0.19
RNF13O43567 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.86□□□□□ -0.19
RNF13O43567 INTS4P1-203ENST00000641008 3683 ntBASIC13.86□□□□□ -0.19
RNF13O43567 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF13O43567 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF13O43567 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF13O43567 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF13O43567 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF13O43567 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
RNF13O43567 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
RNF13O43567 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
RNF13O43567 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF13O43567 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RNF13O43567 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.86□□□□□ -0.19
RNF13O43567 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RNF13O43567 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RNF13O43567 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
RNF13O43567 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF13O43567 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.86□□□□□ -0.19
RNF13O43567 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.86□□□□□ -0.19
RNF13O43567 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RNF13O43567 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RNF13O43567 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.86□□□□□ -0.19
RNF13O43567 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RNF13O43567 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.86□□□□□ -0.19
RNF13O43567 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.86□□□□□ -0.19
RNF13O43567 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RNF13O43567 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.86□□□□□ -0.19
RNF13O43567 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.86□□□□□ -0.19
RNF13O43567 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.86□□□□□ -0.19
RNF13O43567 AC009407.1-201ENST00000568958 598 ntBASIC13.86□□□□□ -0.19
RNF13O43567 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
RNF13O43567 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.86□□□□□ -0.19
RNF13O43567 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF13O43567 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.86□□□□□ -0.19
RNF13O43567 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.86□□□□□ -0.19
RNF13O43567 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.86□□□□□ -0.19
RNF13O43567 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RNF13O43567 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
RNF13O43567 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF13O43567 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RNF13O43567 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF13O43567 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF13O43567 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
RNF13O43567 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RNF13O43567 AC012508.2-201ENST00000567613 1472 ntBASIC13.86□□□□□ -0.19
RNF13O43567 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF13O43567 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RNF13O43567 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF13O43567 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RNF13O43567 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF13O43567 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RNF13O43567 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF13O43567 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
RNF13O43567 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF13O43567 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF13O43567 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RNF13O43567 AC006504.5-208ENST00000588784 2401 ntBASIC13.85□□□□□ -0.19
RNF13O43567 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RNF13O43567 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF13O43567 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RNF13O43567 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.85□□□□□ -0.19
RNF13O43567 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RNF13O43567 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RNF13O43567 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF13O43567 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RNF13O43567 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RNF13O43567 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF13O43567 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.85□□□□□ -0.19
RNF13O43567 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RNF13O43567 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RNF13O43567 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.85□□□□□ -0.19
RNF13O43567 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.85□□□□□ -0.19
RNF13O43567 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.85□□□□□ -0.19
RNF13O43567 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.85□□□□□ -0.19
RNF13O43567 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.85□□□□□ -0.19
RNF13O43567 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.85□□□□□ -0.19
RNF13O43567 AC004890.2-204ENST00000481968 304 ntBASIC13.85□□□□□ -0.19
RNF13O43567 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RNF13O43567 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.85□□□□□ -0.19
RNF13O43567 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.85□□□□□ -0.19
RNF13O43567 SRD5A3P1-201ENST00000603021 949 ntBASIC13.85□□□□□ -0.19
RNF13O43567 AC000095.1-201ENST00000603208 874 ntBASIC13.85□□□□□ -0.19
RNF13O43567 AC008738.7-201ENST00000609744 511 ntBASIC13.85□□□□□ -0.19
RNF13O43567 AL645728.2-202ENST00000641679 227 ntBASIC13.85□□□□□ -0.19
RNF13O43567 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms