Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
XRCC2O43543 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.24□□□□□ -0.29
XRCC2O43543 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.23□□□□□ -0.29
XRCC2O43543 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
XRCC2O43543 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.23□□□□□ -0.29
XRCC2O43543 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.23□□□□□ -0.29
XRCC2O43543 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
XRCC2O43543 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 LILRP1-201ENST00000444199 1370 ntBASIC13.23□□□□□ -0.29
XRCC2O43543 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
XRCC2O43543 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
XRCC2O43543 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
XRCC2O43543 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 AC093525.8-201ENST00000624099 1342 ntBASIC13.23□□□□□ -0.29
XRCC2O43543 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.23□□□□□ -0.29
XRCC2O43543 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.23□□□□□ -0.29
XRCC2O43543 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.23□□□□□ -0.29
XRCC2O43543 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 AL353779.1-201ENST00000434793 351 ntBASIC13.23□□□□□ -0.29
XRCC2O43543 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.23□□□□□ -0.29
XRCC2O43543 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.23□□□□□ -0.29
XRCC2O43543 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.23□□□□□ -0.29
XRCC2O43543 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.23□□□□□ -0.29
XRCC2O43543 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.23□□□□□ -0.29
XRCC2O43543 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
XRCC2O43543 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
XRCC2O43543 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.23□□□□□ -0.29
XRCC2O43543 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.23□□□□□ -0.29
XRCC2O43543 AL138799.1-201ENST00000448213 1675 ntBASIC13.23□□□□□ -0.29
XRCC2O43543 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
XRCC2O43543 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.23□□□□□ -0.29
XRCC2O43543 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.23□□□□□ -0.29
XRCC2O43543 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.23□□□□□ -0.29
XRCC2O43543 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.23□□□□□ -0.29
XRCC2O43543 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
XRCC2O43543 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.23□□□□□ -0.29
XRCC2O43543 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.23□□□□□ -0.29
XRCC2O43543 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
XRCC2O43543 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
XRCC2O43543 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
XRCC2O43543 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
XRCC2O43543 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
XRCC2O43543 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
XRCC2O43543 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.22□□□□□ -0.29
XRCC2O43543 SLC7A15P-201ENST00000424028 1363 ntBASIC13.22□□□□□ -0.29
XRCC2O43543 AL391825.1-201ENST00000457671 1364 ntBASIC13.22□□□□□ -0.29
XRCC2O43543 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
XRCC2O43543 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.22□□□□□ -0.29
XRCC2O43543 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 AL360270.3-201ENST00000609118 1348 ntBASIC13.22□□□□□ -0.29
XRCC2O43543 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.22□□□□□ -0.29
XRCC2O43543 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.22□□□□□ -0.29
XRCC2O43543 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 MIR770-201ENST00000390219 98 ntBASIC13.22□□□□□ -0.29
XRCC2O43543 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.22□□□□□ -0.29
XRCC2O43543 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
XRCC2O43543 VDAC1P7-201ENST00000462417 847 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms