Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC19.2■□□□□ 0.66
KCNQ3O43525 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
KCNQ3O43525 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNQ3O43525 KRT8P19-201ENST00000551916 1455 ntBASIC19.2■□□□□ 0.66
KCNQ3O43525 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC19.2■□□□□ 0.66
KCNQ3O43525 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC19.2■□□□□ 0.66
KCNQ3O43525 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KCNQ3O43525 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNQ3O43525 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNQ3O43525 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
KCNQ3O43525 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNQ3O43525 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.2■□□□□ 0.66
KCNQ3O43525 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC19.2■□□□□ 0.66
KCNQ3O43525 FAM90A7P-201ENST00000382628 1395 ntBASIC19.19■□□□□ 0.66
KCNQ3O43525 FAM90A23P-201ENST00000400136 1395 ntBASIC19.19■□□□□ 0.66
KCNQ3O43525 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNQ3O43525 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNQ3O43525 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.19■□□□□ 0.66
KCNQ3O43525 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNQ3O43525 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
KCNQ3O43525 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNQ3O43525 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNQ3O43525 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
KCNQ3O43525 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNQ3O43525 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
KCNQ3O43525 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC19.19■□□□□ 0.66
KCNQ3O43525 AC012618.1-201ENST00000461223 412 ntBASIC19.19■□□□□ 0.66
KCNQ3O43525 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC19.19■□□□□ 0.66
KCNQ3O43525 NUP210P1-202ENST00000504322 710 ntBASIC19.19■□□□□ 0.66
KCNQ3O43525 AC106794.1-201ENST00000506935 792 ntBASIC19.19■□□□□ 0.66
KCNQ3O43525 FOS-206ENST00000555347 1280 ntTSL 2 BASIC19.19■□□□□ 0.66
KCNQ3O43525 FGFR3P5-201ENST00000564496 886 ntBASIC19.19■□□□□ 0.66
KCNQ3O43525 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
KCNQ3O43525 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC19.19■□□□□ 0.66
KCNQ3O43525 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC19.19■□□□□ 0.66
KCNQ3O43525 BX088702.1-201ENST00000610784 235 ntBASIC19.19■□□□□ 0.66
KCNQ3O43525 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNQ3O43525 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNQ3O43525 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNQ3O43525 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNQ3O43525 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNQ3O43525 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNQ3O43525 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNQ3O43525 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC19.19■□□□□ 0.66
KCNQ3O43525 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNQ3O43525 AL008718.2-201ENST00000609206 1313 ntBASIC19.19■□□□□ 0.66
KCNQ3O43525 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNQ3O43525 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNQ3O43525 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNQ3O43525 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC19.19■□□□□ 0.66
KCNQ3O43525 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC19.19■□□□□ 0.66
KCNQ3O43525 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC19.19■□□□□ 0.66
KCNQ3O43525 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC19.19■□□□□ 0.66
KCNQ3O43525 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNQ3O43525 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KCNQ3O43525 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
KCNQ3O43525 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNQ3O43525 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
KCNQ3O43525 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KCNQ3O43525 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KCNQ3O43525 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNQ3O43525 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNQ3O43525 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNQ3O43525 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
KCNQ3O43525 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNQ3O43525 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KCNQ3O43525 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC19.18■□□□□ 0.66
KCNQ3O43525 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KCNQ3O43525 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC19.18■□□□□ 0.66
KCNQ3O43525 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC19.18■□□□□ 0.66
KCNQ3O43525 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC19.18■□□□□ 0.66
KCNQ3O43525 RN7SL769P-201ENST00000469386 295 ntBASIC19.18■□□□□ 0.66
KCNQ3O43525 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KCNQ3O43525 AC125604.1-201ENST00000496255 707 ntBASIC19.18■□□□□ 0.66
KCNQ3O43525 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC19.18■□□□□ 0.66
KCNQ3O43525 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC19.18■□□□□ 0.66
KCNQ3O43525 AC245884.6-201ENST00000515672 1067 ntBASIC19.18■□□□□ 0.66
KCNQ3O43525 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC19.18■□□□□ 0.66
KCNQ3O43525 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC19.18■□□□□ 0.66
KCNQ3O43525 AC008805.1-201ENST00000590892 364 ntBASIC19.18■□□□□ 0.66
KCNQ3O43525 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
KCNQ3O43525 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC19.18■□□□□ 0.66
KCNQ3O43525 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNQ3O43525 AL805961.1-203ENST00000641078 1258 ntBASIC19.18■□□□□ 0.66
KCNQ3O43525 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KCNQ3O43525 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.18■□□□□ 0.66
KCNQ3O43525 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNQ3O43525 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNQ3O43525 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KCNQ3O43525 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNQ3O43525 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNQ3O43525 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNQ3O43525 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC19.18■□□□□ 0.66
KCNQ3O43525 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC19.18■□□□□ 0.66
KCNQ3O43525 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNQ3O43525 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.17■□□□□ 0.66
KCNQ3O43525 LINC00528-201ENST00000600723 2160 ntBASIC19.17■□□□□ 0.66
KCNQ3O43525 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
KCNQ3O43525 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KCNQ3O43525 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms