Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 CCDC148-201ENST00000283233 3122 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 AC012531.1-201ENST00000562848 2680 ntBASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 SLC6A20-201ENST00000353278 5247 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 CACNA1E-206ENST00000367573 7067 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 KRT89P-201ENST00000620027 1478 ntBASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 HES2-202ENST00000377836 507 ntTSL 2 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 AC024243.1-201ENST00000609234 778 ntBASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 DGCR10-201ENST00000609839 495 ntBASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 AD001527.2-201ENST00000622994 785 ntBASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 SLC35A4-201ENST00000323146 3041 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 ZNF776-201ENST00000317178 5292 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 AC010478.1-201ENST00000601500 6762 ntBASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 PCDHB19P-202ENST00000625133 2914 ntBASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 GPAA1P2-202ENST00000606848 1787 ntBASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 HS1BP3-202ENST00000402541 4358 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 LINC00654-201ENST00000379053 6113 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CHKB-CPT1BH3BT56 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 ARHGEF9-233ENST00000637520 5682 ntTSL 5 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 CICP1-201ENST00000416803 2410 ntBASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 AC073548.1-201ENST00000624088 1882 ntBASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms