Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 AC009542.2-202ENST00000619004 1067 ntBASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 AC138951.2-201ENST00000623455 1161 ntBASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 AP002414.2-201ENST00000591780 3365 ntBASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.83□□□□□ -0.19
NPIPA3F8WFD2 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
NPIPA3F8WFD2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NPIPA3F8WFD2 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.83□□□□□ -0.19
NPIPA3F8WFD2 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NPIPA3F8WFD2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NPIPA3F8WFD2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.19
NPIPA3F8WFD2 AC138035.3-201ENST00000622706 2791 ntBASIC13.83□□□□□ -0.19
NPIPA3F8WFD2 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NPIPA3F8WFD2 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.83□□□□□ -0.19
NPIPA3F8WFD2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
NPIPA3F8WFD2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
NPIPA3F8WFD2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 AC068418.2-201ENST00000577309 3703 ntBASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 RNU1-114P-201ENST00000365297 166 ntBASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 KLF2P2-201ENST00000416807 1039 ntBASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 AC078819.1-201ENST00000547454 765 ntBASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 AC012085.1-201ENST00000548270 765 ntBASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 GPR182-203ENST00000622922 591 ntBASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 AC126365.1-201ENST00000578585 1514 ntBASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 AC126177.1-201ENST00000547829 2218 ntBASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPA3F8WFD2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 AC013268.4-201ENST00000637413 2228 ntBASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms