Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SBNO1A3KN83 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SBNO1A3KN83 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC20.13■□□□□ 0.81
SBNO1A3KN83 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC20.13■□□□□ 0.81
SBNO1A3KN83 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC20.13■□□□□ 0.81
SBNO1A3KN83 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SBNO1A3KN83 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SBNO1A3KN83 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC20.12■□□□□ 0.81
SBNO1A3KN83 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SBNO1A3KN83 RNA5SP359-201ENST00000364838 113 ntBASIC20.12■□□□□ 0.81
SBNO1A3KN83 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC20.12■□□□□ 0.81
SBNO1A3KN83 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC20.12■□□□□ 0.81
SBNO1A3KN83 AC010234.1-201ENST00000494599 870 ntBASIC20.12■□□□□ 0.81
SBNO1A3KN83 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SBNO1A3KN83 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SBNO1A3KN83 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC20.12■□□□□ 0.81
SBNO1A3KN83 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC20.12■□□□□ 0.81
SBNO1A3KN83 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SBNO1A3KN83 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC20.12■□□□□ 0.81
SBNO1A3KN83 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC20.12■□□□□ 0.81
SBNO1A3KN83 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SBNO1A3KN83 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SBNO1A3KN83 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SBNO1A3KN83 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC20.12■□□□□ 0.81
SBNO1A3KN83 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SBNO1A3KN83 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SBNO1A3KN83 AC090502.4-201ENST00000551714 1386 ntBASIC20.12■□□□□ 0.81
SBNO1A3KN83 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SBNO1A3KN83 AC112693.3-201ENST00000624819 1983 ntBASIC20.12■□□□□ 0.81
SBNO1A3KN83 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC20.12■□□□□ 0.81
SBNO1A3KN83 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SBNO1A3KN83 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC20.12■□□□□ 0.81
SBNO1A3KN83 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SBNO1A3KN83 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC20.12■□□□□ 0.81
SBNO1A3KN83 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SBNO1A3KN83 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SBNO1A3KN83 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SBNO1A3KN83 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SBNO1A3KN83 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SBNO1A3KN83 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SBNO1A3KN83 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SBNO1A3KN83 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC20.11■□□□□ 0.81
SBNO1A3KN83 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC20.11■□□□□ 0.81
SBNO1A3KN83 HLA-DQB2-231ENST00000435145 2026 ntBASIC20.11■□□□□ 0.81
SBNO1A3KN83 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SBNO1A3KN83 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SBNO1A3KN83 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SBNO1A3KN83 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC20.11■□□□□ 0.81
SBNO1A3KN83 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC20.11■□□□□ 0.81
SBNO1A3KN83 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC20.11■□□□□ 0.81
SBNO1A3KN83 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SBNO1A3KN83 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC20.11■□□□□ 0.81
SBNO1A3KN83 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC20.11■□□□□ 0.81
SBNO1A3KN83 AP000845.1-201ENST00000581677 2131 ntBASIC20.11■□□□□ 0.81
SBNO1A3KN83 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC20.11■□□□□ 0.81
SBNO1A3KN83 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC20.11■□□□□ 0.81
SBNO1A3KN83 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SBNO1A3KN83 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC20.11■□□□□ 0.81
SBNO1A3KN83 AP001184.1-201ENST00000637936 376 ntBASIC20.11■□□□□ 0.81
SBNO1A3KN83 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SBNO1A3KN83 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SBNO1A3KN83 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SBNO1A3KN83 LILRP1-201ENST00000444199 1370 ntBASIC20.11■□□□□ 0.81
SBNO1A3KN83 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SBNO1A3KN83 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SBNO1A3KN83 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC20.11■□□□□ 0.81
SBNO1A3KN83 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.11■□□□□ 0.81
SBNO1A3KN83 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SBNO1A3KN83 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC20.11■□□□□ 0.81
SBNO1A3KN83 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SBNO1A3KN83 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SBNO1A3KN83 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC20.11■□□□□ 0.81
SBNO1A3KN83 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC20.11■□□□□ 0.81
SBNO1A3KN83 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SBNO1A3KN83 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SBNO1A3KN83 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SBNO1A3KN83 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
SBNO1A3KN83 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC20.11■□□□□ 0.81
SBNO1A3KN83 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC20.11■□□□□ 0.81
SBNO1A3KN83 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SBNO1A3KN83 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SBNO1A3KN83 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC20.11■□□□□ 0.81
SBNO1A3KN83 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.1■□□□□ 0.81
SBNO1A3KN83 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
SBNO1A3KN83 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SBNO1A3KN83 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SBNO1A3KN83 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC20.1■□□□□ 0.81
SBNO1A3KN83 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SBNO1A3KN83 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SBNO1A3KN83 PPOX-204ENST00000462866 473 ntTSL 5 BASIC20.1■□□□□ 0.81
SBNO1A3KN83 AC114947.1-202ENST00000514136 344 ntBASIC20.1■□□□□ 0.81
SBNO1A3KN83 POLD4-208ENST00000532830 904 ntTSL 3 BASIC20.1■□□□□ 0.81
SBNO1A3KN83 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC20.1■□□□□ 0.81
SBNO1A3KN83 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SBNO1A3KN83 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SBNO1A3KN83 AL022344.2-201ENST00000568976 968 ntBASIC20.1■□□□□ 0.81
SBNO1A3KN83 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SBNO1A3KN83 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SBNO1A3KN83 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SBNO1A3KN83 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms