Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 AC067750.1-201ENST00000608826 6545 ntBASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 AC015922.1-201ENST00000421102 1152 ntBASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 AP001005.1-201ENST00000571755 1248 ntBASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 UXT-AS1-201ENST00000590504 1525 ntBASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 RN7SL832P-201ENST00000607781 1756 ntBASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 AC068760.1-201ENST00000493579 1953 ntBASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV3S1A0A5B6 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 AC104109.2-201ENST00000602919 1418 ntBASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms