Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV5-4A0A0C4DH59 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV5-4A0A0C4DH59 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV5-4A0A0C4DH59 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV5-4A0A0C4DH59 FKBP4P6-201ENST00000457486 1332 ntBASIC14.83□□□□□ -0.04
TRBV5-4A0A0C4DH59 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.83□□□□□ -0.04
TRBV5-4A0A0C4DH59 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV5-4A0A0C4DH59 AC140479.7-201ENST00000636301 2332 ntBASIC14.83□□□□□ -0.04
TRBV5-4A0A0C4DH59 AP002414.2-201ENST00000591780 3365 ntBASIC14.83□□□□□ -0.04
TRBV5-4A0A0C4DH59 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV5-4A0A0C4DH59 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.83□□□□□ -0.04
TRBV5-4A0A0C4DH59 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV5-4A0A0C4DH59 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
TRBV5-4A0A0C4DH59 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV5-4A0A0C4DH59 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV5-4A0A0C4DH59 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV5-4A0A0C4DH59 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 LINC00552-201ENST00000625151 2579 ntBASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 PDIA3P1-201ENST00000471856 1510 ntBASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 AL354702.1-201ENST00000442006 1960 ntBASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 RN7SKP175-201ENST00000408472 289 ntBASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 AC112492.5-201ENST00000421897 457 ntBASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 RPL7P3-201ENST00000441388 714 ntBASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 ALG3P1-201ENST00000508806 1114 ntBASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 KRT17P8-201ENST00000540749 863 ntBASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 AC113367.3-201ENST00000508316 1912 ntBASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.82□□□□□ -0.04
TRBV5-4A0A0C4DH59 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 AL512343.1-201ENST00000605837 169 ntBASIC14.81□□□□□ -0.04
TRBV5-4A0A0C4DH59 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms