Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 MIR4741-201ENST00000579822 90 ntBASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 FLJ16779-201ENST00000612722 7638 ntBASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 ELK2AP-201ENST00000392510 1007 ntBASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 RPSAP36-202ENST00000494591 1261 ntBASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 AC104982.3-201ENST00000581995 514 ntBASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.22□□□□□ -0.13
PCDHGA9Q9Y5G4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms