Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 LINC00528-201ENST00000600723 2160 ntBASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 LINC01101-201ENST00000622953 1884 ntBASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 TOMM22P5-201ENST00000416399 439 ntBASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 AC011467.4-201ENST00000594891 528 ntBASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 AC093512.1-201ENST00000617969 520 ntBASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
POLR1DQ9Y2S0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 ZNF890P-202ENST00000530367 1156 ntBASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 AC135586.1-201ENST00000539323 574 ntBASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms