Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MIR7706-201ENST00000613747 67 ntBASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 AC004877.2-201ENST00000623941 599 ntBASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
RCL1Q9Y2P8 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 AC002056.1-201ENST00000395613 760 ntBASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 KRT18P35-201ENST00000510488 1269 ntBASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 AC022447.6-201ENST00000515522 438 ntBASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
RCL1Q9Y2P8 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.46□□□□□ -0.42
RCL1Q9Y2P8 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.46□□□□□ -0.42
RCL1Q9Y2P8 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.46□□□□□ -0.42
RCL1Q9Y2P8 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
RCL1Q9Y2P8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RCL1Q9Y2P8 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.46□□□□□ -0.42
RCL1Q9Y2P8 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RCL1Q9Y2P8 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.46□□□□□ -0.42
RCL1Q9Y2P8 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RCL1Q9Y2P8 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
RCL1Q9Y2P8 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RCL1Q9Y2P8 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RCL1Q9Y2P8 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RCL1Q9Y2P8 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms