Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AL033527.4-201ENST00000641026 673 ntBASIC14□□□□□ -0.17
RPH3AQ9Y2J0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RPH3AQ9Y2J0 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14□□□□□ -0.17
RPH3AQ9Y2J0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RPH3AQ9Y2J0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14□□□□□ -0.17
RPH3AQ9Y2J0 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RPH3AQ9Y2J0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14□□□□□ -0.17
RPH3AQ9Y2J0 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RPH3AQ9Y2J0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14□□□□□ -0.17
RPH3AQ9Y2J0 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14□□□□□ -0.17
RPH3AQ9Y2J0 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14□□□□□ -0.17
RPH3AQ9Y2J0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RPH3AQ9Y2J0 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RPH3AQ9Y2J0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14□□□□□ -0.17
RPH3AQ9Y2J0 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RPH3AQ9Y2J0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RPH3AQ9Y2J0 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RPH3AQ9Y2J0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RPH3AQ9Y2J0 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RPH3AQ9Y2J0 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RPH3AQ9Y2J0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RPH3AQ9Y2J0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14□□□□□ -0.17
RPH3AQ9Y2J0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14□□□□□ -0.17
RPH3AQ9Y2J0 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 AC097376.2-205ENST00000610159 5334 ntBASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 AL138799.1-201ENST00000448213 1675 ntBASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 AC138035.3-201ENST00000622706 2791 ntBASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 TMEM14DP-201ENST00000422205 345 ntBASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 FAM8A2P-201ENST00000528813 1142 ntBASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 TDH-203ENST00000531764 1110 ntBASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 AC093813.1-201ENST00000605066 256 ntBASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 AC126365.1-201ENST00000578585 1514 ntBASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 AC006486.2-201ENST00000624246 2199 ntBASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPH3AQ9Y2J0 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RPH3AQ9Y2J0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.98□□□□□ -0.17
RPH3AQ9Y2J0 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPH3AQ9Y2J0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.98□□□□□ -0.17
RPH3AQ9Y2J0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPH3AQ9Y2J0 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPH3AQ9Y2J0 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPH3AQ9Y2J0 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RPH3AQ9Y2J0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RPH3AQ9Y2J0 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPH3AQ9Y2J0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
RPH3AQ9Y2J0 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RPH3AQ9Y2J0 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RPH3AQ9Y2J0 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.98□□□□□ -0.17
RPH3AQ9Y2J0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPH3AQ9Y2J0 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPH3AQ9Y2J0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RPH3AQ9Y2J0 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RPH3AQ9Y2J0 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC13.98□□□□□ -0.17
RPH3AQ9Y2J0 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RPH3AQ9Y2J0 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
RPH3AQ9Y2J0 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms