Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 NME2-201ENST00000393183 568 ntTSL 2 BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 AZGP1P1-201ENST00000411909 902 ntBASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 FAM8A3P-201ENST00000427218 844 ntBASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 PON3-203ENST00000427422 894 ntTSL 3 BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 METTL21AP1-201ENST00000438852 635 ntBASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 HLA-V-204ENST00000476601 1289 ntBASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 AC027369.6-201ENST00000525520 931 ntBASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 AC140878.1-201ENST00000565277 250 ntBASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 AC015911.4-201ENST00000588022 1070 ntBASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 AC093028.1-201ENST00000622998 982 ntBASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 TKT-202ENST00000423516 2075 ntTSL 2 BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
HHLA3Q9XRX5 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 RDX-218ENST00000544551 4117 ntTSL 2 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 INTS4P1-203ENST00000641008 3683 ntBASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 AC073592.8-201ENST00000624126 511 ntBASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
HHLA3Q9XRX5 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms