Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 CU634019.7-201ENST00000624153 1185 ntBASIC16.62■□□□□ 0.25
L1RE1Q9UN81 FP236241.2-201ENST00000624906 1185 ntBASIC16.62■□□□□ 0.25
L1RE1Q9UN81 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.62■□□□□ 0.25
L1RE1Q9UN81 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.62■□□□□ 0.25
L1RE1Q9UN81 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.62■□□□□ 0.25
L1RE1Q9UN81 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
L1RE1Q9UN81 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
L1RE1Q9UN81 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.62■□□□□ 0.25
L1RE1Q9UN81 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
L1RE1Q9UN81 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
L1RE1Q9UN81 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
L1RE1Q9UN81 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
L1RE1Q9UN81 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.62■□□□□ 0.25
L1RE1Q9UN81 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
L1RE1Q9UN81 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 HSPA7-201ENST00000445535 1927 ntBASIC16.61■□□□□ 0.25
L1RE1Q9UN81 AC084364.1-201ENST00000551967 1556 ntBASIC16.61■□□□□ 0.25
L1RE1Q9UN81 BX640514.1-201ENST00000583223 1918 ntBASIC16.61■□□□□ 0.25
L1RE1Q9UN81 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 SOCS2P1-201ENST00000417727 557 ntBASIC16.61■□□□□ 0.25
L1RE1Q9UN81 AL162726.2-201ENST00000438986 1017 ntBASIC16.61■□□□□ 0.25
L1RE1Q9UN81 TTTY23B-201ENST00000442790 549 ntBASIC16.61■□□□□ 0.25
L1RE1Q9UN81 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 AC010319.3-201ENST00000597028 470 ntBASIC16.61■□□□□ 0.25
L1RE1Q9UN81 AC025181.2-201ENST00000606994 802 ntBASIC16.61■□□□□ 0.25
L1RE1Q9UN81 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
L1RE1Q9UN81 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 U91328.1-201ENST00000437528 223 ntBASIC16.6■□□□□ 0.25
L1RE1Q9UN81 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.6■□□□□ 0.25
L1RE1Q9UN81 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.59■□□□□ 0.25
L1RE1Q9UN81 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms