Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
PCDHA4Q9UN74 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHA4Q9UN74 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHA4Q9UN74 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDHA4Q9UN74 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHA4Q9UN74 CROCCP4-201ENST00000457096 498 ntBASIC17.27■□□□□ 0.36
PCDHA4Q9UN74 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHA4Q9UN74 AC018529.2-202ENST00000611482 3087 ntBASIC17.27■□□□□ 0.36
PCDHA4Q9UN74 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PCDHA4Q9UN74 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHA4Q9UN74 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHA4Q9UN74 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHA4Q9UN74 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHA4Q9UN74 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHA4Q9UN74 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.27■□□□□ 0.35
PCDHA4Q9UN74 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHA4Q9UN74 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHA4Q9UN74 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 CLUHP2-201ENST00000426660 1303 ntBASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 RNA5SP486-201ENST00000515961 83 ntBASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 KRT17P8-201ENST00000540749 863 ntBASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA4Q9UN74 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 AC079776.1-201ENST00000401540 1152 ntBASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 CNN2P8-201ENST00000421872 913 ntBASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 FAM197Y7-201ENST00000432892 766 ntBASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 MESTP3-201ENST00000503460 968 ntBASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 KRT90P-201ENST00000549264 1064 ntBASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 ECM1P1-201ENST00000604092 1279 ntBASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms