Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 KRT8P14-201ENST00000414254 1442 ntBASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 MIR600HG-201ENST00000449175 5984 ntBASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 MIR5189-201ENST00000577370 114 ntBASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 AC010319.3-201ENST00000597028 470 ntBASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 MSTO2P-201ENST00000314835 1709 ntBASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
KCMF1Q9P0J7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 GK-202ENST00000378941 458 ntTSL 3 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 DUX4L47-201ENST00000566374 394 ntBASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms