Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 AC012508.2-201ENST00000567613 1472 ntBASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 AKAP8P1-201ENST00000434743 1349 ntBASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 CICP17-201ENST00000418553 2377 ntBASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 FAM220BP-201ENST00000377689 816 ntBASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 AC069120.2-201ENST00000524091 540 ntBASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 AC026150.2-201ENST00000564693 1156 ntBASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 AL158211.3-201ENST00000607385 239 ntBASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 SPCS2P4-201ENST00000436160 681 ntBASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 AC097493.3-201ENST00000509725 367 ntBASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 AC025048.6-201ENST00000634326 1161 ntBASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 AC089987.1-201ENST00000551654 2209 ntBASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
CCM2LQ9NUG4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms