Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CNTNAP3Q9BZ76 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
CNTNAP3Q9BZ76 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CNTNAP3Q9BZ76 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CNTNAP3Q9BZ76 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.44□□□□□ -0.1
CNTNAP3Q9BZ76 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CNTNAP3Q9BZ76 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CNTNAP3Q9BZ76 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.44□□□□□ -0.1
CNTNAP3Q9BZ76 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.44□□□□□ -0.1
CNTNAP3Q9BZ76 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CNTNAP3Q9BZ76 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CNTNAP3Q9BZ76 ZNF436-AS1-201ENST00000335648 2547 ntBASIC14.44□□□□□ -0.1
CNTNAP3Q9BZ76 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.44□□□□□ -0.1
CNTNAP3Q9BZ76 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CNTNAP3Q9BZ76 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CNTNAP3Q9BZ76 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CNTNAP3Q9BZ76 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CNTNAP3Q9BZ76 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 AC022188.1-201ENST00000620960 1664 ntBASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 NHP2P1-201ENST00000335274 462 ntBASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 AL357563.1-201ENST00000404728 395 ntBASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 CHMP1AP1-201ENST00000445563 662 ntBASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 AC053503.3-201ENST00000448375 114 ntBASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 RN7SL258P-201ENST00000478664 300 ntBASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 AC026803.1-201ENST00000569130 274 ntBASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 AC055811.3-201ENST00000584952 686 ntBASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 FAM90A7P-201ENST00000382628 1395 ntBASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 FAM90A23P-201ENST00000400136 1395 ntBASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 FAM90A21P-201ENST00000510875 1396 ntBASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 FAM90A15P-201ENST00000514465 1395 ntBASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 FAM90A6P-201ENST00000515148 1394 ntBASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 FAM90A16P-201ENST00000526662 1395 ntBASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 FAM90A9P-201ENST00000527940 1395 ntBASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 FAM90A5P-201ENST00000528738 1395 ntBASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 FAM90A14P-201ENST00000530386 1395 ntBASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 FAM90A13P-201ENST00000534703 1395 ntBASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.43□□□□□ -0.1
CNTNAP3Q9BZ76 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CNTNAP3Q9BZ76 AC092068.3-201ENST00000587894 2016 ntBASIC14.42□□□□□ -0.1
CNTNAP3Q9BZ76 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CNTNAP3Q9BZ76 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CNTNAP3Q9BZ76 LINC00554-201ENST00000564841 3011 ntBASIC14.42□□□□□ -0.1
CNTNAP3Q9BZ76 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.42□□□□□ -0.1
CNTNAP3Q9BZ76 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CNTNAP3Q9BZ76 U82695.1-201ENST00000635752 1889 ntBASIC14.42□□□□□ -0.1
CNTNAP3Q9BZ76 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.42□□□□□ -0.1
CNTNAP3Q9BZ76 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CNTNAP3Q9BZ76 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms