Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 F11R-204ENST00000537746 1245 ntTSL 2 BASIC19.45■□□□□ 0.7
ABCA3Q99758 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC19.45■□□□□ 0.7
ABCA3Q99758 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC19.45■□□□□ 0.7
ABCA3Q99758 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ABCA3Q99758 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ABCA3Q99758 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ABCA3Q99758 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ABCA3Q99758 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ABCA3Q99758 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ABCA3Q99758 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ABCA3Q99758 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ABCA3Q99758 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.44■□□□□ 0.7
ABCA3Q99758 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ABCA3Q99758 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ABCA3Q99758 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ABCA3Q99758 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ABCA3Q99758 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.44■□□□□ 0.7
ABCA3Q99758 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ABCA3Q99758 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ABCA3Q99758 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ABCA3Q99758 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ABCA3Q99758 MIR566-201ENST00000385187 94 ntBASIC19.44■□□□□ 0.7
ABCA3Q99758 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ABCA3Q99758 NME6-208ENST00000435684 599 ntTSL 2 BASIC19.44■□□□□ 0.7
ABCA3Q99758 RPL3P5-201ENST00000441645 1232 ntBASIC19.44■□□□□ 0.7
ABCA3Q99758 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ABCA3Q99758 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ABCA3Q99758 MIR5001-201ENST00000580185 100 ntBASIC19.44■□□□□ 0.7
ABCA3Q99758 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC19.44■□□□□ 0.7
ABCA3Q99758 RARS-210ENST00000626454 177 ntTSL 5 BASIC19.44■□□□□ 0.7
ABCA3Q99758 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19.44■□□□□ 0.7
ABCA3Q99758 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ABCA3Q99758 API5-203ENST00000455725 2257 ntTSL 2 BASIC19.44■□□□□ 0.7
ABCA3Q99758 AC139712.1-201ENST00000378256 1875 ntBASIC19.44■□□□□ 0.7
ABCA3Q99758 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ABCA3Q99758 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ABCA3Q99758 RPL3P2-204ENST00000413027 1203 ntBASIC19.43■□□□□ 0.7
ABCA3Q99758 ALG1L7P-201ENST00000502317 768 ntBASIC19.43■□□□□ 0.7
ABCA3Q99758 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC19.43■□□□□ 0.7
ABCA3Q99758 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC19.43■□□□□ 0.7
ABCA3Q99758 AC006548.2-201ENST00000605217 529 ntBASIC19.43■□□□□ 0.7
ABCA3Q99758 PTPN20CP-201ENST00000614090 920 ntBASIC19.43■□□□□ 0.7
ABCA3Q99758 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ABCA3Q99758 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ABCA3Q99758 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ABCA3Q99758 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.43■□□□□ 0.7
ABCA3Q99758 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.43■□□□□ 0.7
ABCA3Q99758 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ABCA3Q99758 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.43■□□□□ 0.7
ABCA3Q99758 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ABCA3Q99758 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC19.43■□□□□ 0.7
ABCA3Q99758 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
ABCA3Q99758 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ABCA3Q99758 PCDH8P1-201ENST00000428983 2773 ntBASIC19.43■□□□□ 0.7
ABCA3Q99758 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCA3Q99758 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ABCA3Q99758 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
ABCA3Q99758 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC19.42■□□□□ 0.7
ABCA3Q99758 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC19.42■□□□□ 0.7
ABCA3Q99758 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC19.42■□□□□ 0.7
ABCA3Q99758 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC19.42■□□□□ 0.7
ABCA3Q99758 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ABCA3Q99758 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC19.42■□□□□ 0.7
ABCA3Q99758 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ABCA3Q99758 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCA3Q99758 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCA3Q99758 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCA3Q99758 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCA3Q99758 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC19.42■□□□□ 0.7
ABCA3Q99758 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ABCA3Q99758 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCA3Q99758 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
ABCA3Q99758 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCA3Q99758 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC19.42■□□□□ 0.7
ABCA3Q99758 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC19.42■□□□□ 0.7
ABCA3Q99758 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ABCA3Q99758 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ABCA3Q99758 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC19.42■□□□□ 0.7
ABCA3Q99758 AC018638.5-201ENST00000450885 754 ntBASIC19.42■□□□□ 0.7
ABCA3Q99758 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC19.42■□□□□ 0.7
ABCA3Q99758 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC19.42■□□□□ 0.7
ABCA3Q99758 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC19.42■□□□□ 0.7
ABCA3Q99758 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC19.42■□□□□ 0.7
ABCA3Q99758 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCA3Q99758 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ABCA3Q99758 LINC00244-201ENST00000625073 613 ntBASIC19.42■□□□□ 0.7
ABCA3Q99758 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ABCA3Q99758 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCA3Q99758 ENPP7P8-202ENST00000527856 1345 ntBASIC19.42■□□□□ 0.7
ABCA3Q99758 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ABCA3Q99758 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC19.42■□□□□ 0.7
ABCA3Q99758 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ABCA3Q99758 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ABCA3Q99758 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC19.42■□□□□ 0.7
ABCA3Q99758 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ABCA3Q99758 AP005117.1-202ENST00000581724 1908 ntBASIC19.42■□□□□ 0.7
ABCA3Q99758 AC067931.2-201ENST00000623655 2003 ntBASIC19.42■□□□□ 0.7
ABCA3Q99758 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCA3Q99758 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCA3Q99758 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms