Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NOTCH4Q99466 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NOTCH4Q99466 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NOTCH4Q99466 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.28■□□□□ 0.04
NOTCH4Q99466 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.28■□□□□ 0.04
NOTCH4Q99466 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NOTCH4Q99466 AC007950.2-201ENST00000615045 2347 ntBASIC15.28■□□□□ 0.04
NOTCH4Q99466 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NOTCH4Q99466 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NOTCH4Q99466 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.28■□□□□ 0.04
NOTCH4Q99466 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NOTCH4Q99466 RPS9P1-201ENST00000419943 583 ntBASIC15.28■□□□□ 0.04
NOTCH4Q99466 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NOTCH4Q99466 RN7SL8P-201ENST00000461771 266 ntBASIC15.28■□□□□ 0.04
NOTCH4Q99466 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NOTCH4Q99466 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.28■□□□□ 0.04
NOTCH4Q99466 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.28■□□□□ 0.04
NOTCH4Q99466 AC027237.1-201ENST00000560942 655 ntBASIC15.28■□□□□ 0.04
NOTCH4Q99466 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NOTCH4Q99466 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NOTCH4Q99466 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NOTCH4Q99466 KRT18P9-201ENST00000604826 1300 ntBASIC15.28■□□□□ 0.04
NOTCH4Q99466 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.28■□□□□ 0.04
NOTCH4Q99466 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NOTCH4Q99466 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NOTCH4Q99466 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NOTCH4Q99466 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.28■□□□□ 0.04
NOTCH4Q99466 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
NOTCH4Q99466 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NOTCH4Q99466 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
NOTCH4Q99466 MIR557-201ENST00000385239 98 ntBASIC15.27■□□□□ 0.04
NOTCH4Q99466 AL627231.1-201ENST00000394467 1125 ntBASIC15.27■□□□□ 0.04
NOTCH4Q99466 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NOTCH4Q99466 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.27■□□□□ 0.04
NOTCH4Q99466 AC008723.1-201ENST00000506922 207 ntBASIC15.27■□□□□ 0.04
NOTCH4Q99466 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.27■□□□□ 0.04
NOTCH4Q99466 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NOTCH4Q99466 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.27■□□□□ 0.04
NOTCH4Q99466 AC005632.3-201ENST00000605544 308 ntBASIC15.27■□□□□ 0.04
NOTCH4Q99466 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.27■□□□□ 0.04
NOTCH4Q99466 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NOTCH4Q99466 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
NOTCH4Q99466 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.27■□□□□ 0.04
NOTCH4Q99466 KRT8P28-201ENST00000433288 1390 ntBASIC15.27■□□□□ 0.04
NOTCH4Q99466 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.27■□□□□ 0.04
NOTCH4Q99466 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
NOTCH4Q99466 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.27■□□□□ 0.04
NOTCH4Q99466 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
NOTCH4Q99466 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NOTCH4Q99466 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NOTCH4Q99466 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.27■□□□□ 0.03
NOTCH4Q99466 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NOTCH4Q99466 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NOTCH4Q99466 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.27■□□□□ 0.03
NOTCH4Q99466 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NOTCH4Q99466 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.27■□□□□ 0.03
NOTCH4Q99466 MIR4750-201ENST00000584564 56 ntBASIC15.27■□□□□ 0.03
NOTCH4Q99466 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.27■□□□□ 0.03
NOTCH4Q99466 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.27■□□□□ 0.03
NOTCH4Q99466 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.27■□□□□ 0.03
NOTCH4Q99466 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.27■□□□□ 0.03
NOTCH4Q99466 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NOTCH4Q99466 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NOTCH4Q99466 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NOTCH4Q99466 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NOTCH4Q99466 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.27■□□□□ 0.03
NOTCH4Q99466 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.27■□□□□ 0.03
NOTCH4Q99466 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NOTCH4Q99466 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NOTCH4Q99466 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NOTCH4Q99466 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.27■□□□□ 0.03
NOTCH4Q99466 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NOTCH4Q99466 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NOTCH4Q99466 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NOTCH4Q99466 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
NOTCH4Q99466 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NOTCH4Q99466 AP000356.3-201ENST00000382243 753 ntBASIC15.26■□□□□ 0.03
NOTCH4Q99466 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NOTCH4Q99466 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NOTCH4Q99466 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.26■□□□□ 0.03
NOTCH4Q99466 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NOTCH4Q99466 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.26■□□□□ 0.03
NOTCH4Q99466 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC15.26■□□□□ 0.03
NOTCH4Q99466 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.26■□□□□ 0.03
NOTCH4Q99466 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NOTCH4Q99466 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.26■□□□□ 0.03
NOTCH4Q99466 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NOTCH4Q99466 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
NOTCH4Q99466 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NOTCH4Q99466 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.26■□□□□ 0.03
NOTCH4Q99466 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.26■□□□□ 0.03
NOTCH4Q99466 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NOTCH4Q99466 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.26■□□□□ 0.03
NOTCH4Q99466 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NOTCH4Q99466 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NOTCH4Q99466 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NOTCH4Q99466 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NOTCH4Q99466 AC091951.1-201ENST00000512854 2465 ntBASIC15.26■□□□□ 0.03
NOTCH4Q99466 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NOTCH4Q99466 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms