Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.9□□□□□ -0.34
CLCC1Q96S66 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.9□□□□□ -0.34
CLCC1Q96S66 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.9□□□□□ -0.34
CLCC1Q96S66 AC211486.1-202ENST00000416371 468 ntBASIC12.9□□□□□ -0.34
CLCC1Q96S66 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.9□□□□□ -0.34
CLCC1Q96S66 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.9□□□□□ -0.34
CLCC1Q96S66 KRT18P32-201ENST00000424695 1287 ntBASIC12.9□□□□□ -0.34
CLCC1Q96S66 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 AC142381.1-201ENST00000426099 345 ntBASIC12.9□□□□□ -0.34
CLCC1Q96S66 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.9□□□□□ -0.34
CLCC1Q96S66 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.9□□□□□ -0.34
CLCC1Q96S66 AC211476.1-201ENST00000503899 468 ntBASIC12.9□□□□□ -0.34
CLCC1Q96S66 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CLCC1Q96S66 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.9□□□□□ -0.34
CLCC1Q96S66 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.9□□□□□ -0.34
CLCC1Q96S66 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.9□□□□□ -0.34
CLCC1Q96S66 KRT8P23-201ENST00000560090 1207 ntBASIC12.9□□□□□ -0.34
CLCC1Q96S66 LINC01225-203ENST00000563550 1244 ntBASIC12.9□□□□□ -0.34
CLCC1Q96S66 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.9□□□□□ -0.34
CLCC1Q96S66 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.9□□□□□ -0.34
CLCC1Q96S66 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.9□□□□□ -0.34
CLCC1Q96S66 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.9□□□□□ -0.34
CLCC1Q96S66 AC022145.2-201ENST00000598203 171 ntBASIC12.9□□□□□ -0.34
CLCC1Q96S66 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.9□□□□□ -0.34
CLCC1Q96S66 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.9□□□□□ -0.34
CLCC1Q96S66 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CLCC1Q96S66 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CLCC1Q96S66 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CLCC1Q96S66 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.9□□□□□ -0.34
CLCC1Q96S66 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CLCC1Q96S66 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.9□□□□□ -0.35
CLCC1Q96S66 MBLAC2-202ENST00000514906 1936 ntBASIC12.9□□□□□ -0.35
CLCC1Q96S66 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CLCC1Q96S66 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CLCC1Q96S66 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.9□□□□□ -0.35
CLCC1Q96S66 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.9□□□□□ -0.35
CLCC1Q96S66 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLCC1Q96S66 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCC1Q96S66 AL139385.1-201ENST00000611744 3272 ntBASIC12.89□□□□□ -0.35
CLCC1Q96S66 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCC1Q96S66 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCC1Q96S66 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCC1Q96S66 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCC1Q96S66 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 AC005562.1-201ENST00000583030 3219 ntBASIC12.89□□□□□ -0.35
CLCC1Q96S66 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCC1Q96S66 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCC1Q96S66 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCC1Q96S66 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLCC1Q96S66 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCC1Q96S66 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCC1Q96S66 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 RPS8P6-201ENST00000426177 609 ntBASIC12.89□□□□□ -0.35
CLCC1Q96S66 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLCC1Q96S66 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.89□□□□□ -0.35
CLCC1Q96S66 AC243562.2-201ENST00000561247 970 ntBASIC12.89□□□□□ -0.35
CLCC1Q96S66 AL596442.2-201ENST00000610240 980 ntBASIC12.89□□□□□ -0.35
CLCC1Q96S66 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLCC1Q96S66 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms