Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB40CQ96S21 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB40CQ96S21 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB40CQ96S21 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB40CQ96S21 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB40CQ96S21 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB40CQ96S21 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB40CQ96S21 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB40CQ96S21 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB40CQ96S21 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB40CQ96S21 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB40CQ96S21 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB40CQ96S21 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB40CQ96S21 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB40CQ96S21 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB40CQ96S21 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB40CQ96S21 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB40CQ96S21 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB40CQ96S21 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB40CQ96S21 AL133267.1-201ENST00000398220 340 ntBASIC12.36□□□□□ -0.43
RAB40CQ96S21 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 KRT18P58-201ENST00000527480 1120 ntBASIC12.36□□□□□ -0.43
RAB40CQ96S21 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB40CQ96S21 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB40CQ96S21 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB40CQ96S21 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 AL359183.1-201ENST00000623796 2132 ntBASIC12.36□□□□□ -0.43
RAB40CQ96S21 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB40CQ96S21 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB40CQ96S21 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB40CQ96S21 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
RAB40CQ96S21 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB40CQ96S21 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB40CQ96S21 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB40CQ96S21 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB40CQ96S21 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB40CQ96S21 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 AL355306.1-201ENST00000415580 579 ntBASIC12.35□□□□□ -0.43
RAB40CQ96S21 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.35□□□□□ -0.43
RAB40CQ96S21 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 KRT8P23-201ENST00000560090 1207 ntBASIC12.35□□□□□ -0.43
RAB40CQ96S21 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms