Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 AC005252.3-201ENST00000623855 2258 ntBASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 RPL13AP23-201ENST00000480739 586 ntBASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 BANF1P1-201ENST00000553684 263 ntBASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 AC055717.3-201ENST00000622967 595 ntBASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 AC131212.3-201ENST00000624087 4219 ntBASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.38□□□□□ -0.11
NSMCE2Q96MF7 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 AC069335.1-201ENST00000489972 472 ntBASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 DMBT1P1-203ENST00000636837 4628 ntBASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
NSMCE2Q96MF7 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms