Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 ZBED1P1-201ENST00000502364 1930 ntBASIC17.42■□□□□ 0.38
CDCA5Q96FF9 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.42■□□□□ 0.38
CDCA5Q96FF9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 AP000911.2-201ENST00000534330 502 ntBASIC17.41■□□□□ 0.38
CDCA5Q96FF9 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 AC027237.1-201ENST00000560942 655 ntBASIC17.41■□□□□ 0.38
CDCA5Q96FF9 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CDCA5Q96FF9 SALL4P5-201ENST00000419001 1760 ntBASIC17.4■□□□□ 0.38
CDCA5Q96FF9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 FAU-202ENST00000434372 533 ntTSL 2 BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 GCOM2-201ENST00000509133 1104 ntBASIC17.4■□□□□ 0.38
CDCA5Q96FF9 AC084752.1-201ENST00000509766 622 ntBASIC17.4■□□□□ 0.38
CDCA5Q96FF9 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA5Q96FF9 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC17.39■□□□□ 0.38
CDCA5Q96FF9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDCA5Q96FF9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
CDCA5Q96FF9 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 HLA-DQB1-202ENST00000399079 1501 ntBASIC17.39■□□□□ 0.37
CDCA5Q96FF9 TMBIM7P-202ENST00000641474 1516 ntBASIC17.39■□□□□ 0.37
CDCA5Q96FF9 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms