Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 AC003102.2-201ENST00000589195 1469 ntBASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 COX5BP1-201ENST00000507622 393 ntBASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 AC073413.1-201ENST00000603927 732 ntBASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 FKBP4P6-201ENST00000457486 1332 ntBASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ECHDC3Q96DC8 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 AC006058.4-201ENST00000624016 1670 ntBASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 AC103702.1-201ENST00000548801 2630 ntBASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 RN7SKP175-201ENST00000408472 289 ntBASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 FAM21FP-201ENST00000426241 1131 ntBASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ECHDC3Q96DC8 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
ECHDC3Q96DC8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ECHDC3Q96DC8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.08■□□□□ 0.01
ECHDC3Q96DC8 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ECHDC3Q96DC8 AJ011931.1-201ENST00000618749 2492 ntBASIC15.08■□□□□ 0.01
ECHDC3Q96DC8 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ECHDC3Q96DC8 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.08■□□□□ 0.01
ECHDC3Q96DC8 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.08■□□□□ 0.01
ECHDC3Q96DC8 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
ECHDC3Q96DC8 AC011840.2-201ENST00000563063 1520 ntBASIC15.08■□□□□ 0.01
ECHDC3Q96DC8 INE2-201ENST00000630399 1874 ntBASIC15.08■□□□□ 0.01
ECHDC3Q96DC8 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ECHDC3Q96DC8 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ECHDC3Q96DC8 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
ECHDC3Q96DC8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
ECHDC3Q96DC8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.08■□□□□ 0
ECHDC3Q96DC8 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.08■□□□□ 0
ECHDC3Q96DC8 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ECHDC3Q96DC8 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ECHDC3Q96DC8 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ECHDC3Q96DC8 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms