Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GRAMD1AQ96CP6 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.66■□□□□ 0.1
GRAMD1AQ96CP6 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GRAMD1AQ96CP6 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
GRAMD1AQ96CP6 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GRAMD1AQ96CP6 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GRAMD1AQ96CP6 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
GRAMD1AQ96CP6 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GRAMD1AQ96CP6 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
GRAMD1AQ96CP6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.66■□□□□ 0.1
GRAMD1AQ96CP6 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.66■□□□□ 0.1
GRAMD1AQ96CP6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GRAMD1AQ96CP6 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GRAMD1AQ96CP6 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.66■□□□□ 0.1
GRAMD1AQ96CP6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.66■□□□□ 0.1
GRAMD1AQ96CP6 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 SPDYE17-201ENST00000412399 783 ntBASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 AC010327.5-201ENST00000586923 3061 ntBASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 AL359881.3-201ENST00000602640 1721 ntBASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GRAMD1AQ96CP6 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
GRAMD1AQ96CP6 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 AC117489.1-201ENST00000625169 3217 ntBASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 KRT8P12-202ENST00000472924 1397 ntBASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 DGCR5-201ENST00000399539 862 ntBASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 INE1-201ENST00000456273 945 ntBASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 AC010336.2-201ENST00000564226 506 ntBASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 MIR6805-201ENST00000615055 62 ntBASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GRAMD1AQ96CP6 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms